RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
TPM4-209ENST00000588483 TSNAXQ99598 290 aaKnown RBP8.21□□□□□ -1.1
TPM4-209ENST00000588483 GINS4Q9BRT9 223 aa8.21□□□□□ -1.1
TPM4-209ENST00000588483 TNCP24821 2201 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 H7C2Y5 167 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 M0R1X1 148 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 TUSC2O75896 110 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 SLC22A5O76082 557 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 IGLV2-23P01705 113 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 HLA-DQB1P01920 261 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 RRASP10301 218 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 RPS19P39019 145 aaKnown RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 LGALS7P47929 136 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 CX3CL1P78423 397 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 RUNX1Q01196 453 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 FHL3Q13643 280 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 KIAA0141Q14154 515 aaPredicted RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 TMEM177Q53S58 311 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 ZNF562Q6V9R5 426 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 REC114Q7Z4M0 266 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 DRAXINQ8NBI3 349 aaPredicted RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 KLHL30-AS1Q8NEE0 82 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 SLC25A46Q96AG3 418 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 FLYWCH2Q96CP2 140 aaKnown RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
TPM4-209ENST00000588483 ADTRPQ96IZ2 230 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 ST6GALNAC5Q9BVH7 336 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 FBXL15Q9H469 300 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 SLC35D1Q9NTN3 355 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 ANXA10Q9UJ72 324 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
TPM4-209ENST00000588483 TRAV41A0A0B4J266 112 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 G3V318 75 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 XRCC3O43542 346 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 IGLV2-14P01704 120 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 CRYGBP07316 175 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 SMIM18P0DKX4 95 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 EGR2P11161 476 aaPredicted RBP8.19□□□□□ -1.1
TPM4-209ENST00000588483 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
TPM4-209ENST00000588483 LINC00205P59089 165 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 SSBP2P81877 361 aaPredicted RBP8.19□□□□□ -1.1
TPM4-209ENST00000588483 MSMO1Q15800 293 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 AKIRIN2Q53H80 203 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 UBE2NLQ5JXB2 153 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 OVCH2Q7RTZ1 564 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 HOGA1Q86XE5 327 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 ZNF645Q8N7E2 425 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 UBE2E2Q96LR5 201 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 CMTM3Q96MX0 182 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 FUNDC2Q9BWH2 189 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 AUNIPQ9H7T9 357 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 PARP11Q9NR21 331 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 DIABLOQ9NR28 239 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 NECAP2Q9NVZ3 263 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 ANAPC10Q9UM13 185 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 FBXO7Q9Y3I1 522 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 OR2W1Q9Y3N9 320 aa8.19□□□□□ -1.1
TPM4-209ENST00000588483 TRAV18A0A075B6X5 111 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 LINC00473A8K010 186 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 NUDT19A8MXV4 375 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 FCN1O00602 326 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 IGLL1P15814 213 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 CBX5P45973 191 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 LUMP51884 338 aaPredicted RBP8.18□□□□□ -1.1
TPM4-209ENST00000588483 RPS16P62249 146 aaKnown RBP8.18□□□□□ -1.1
TPM4-209ENST00000588483 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 EIF4EBP1Q13541 118 aaPredicted RBP8.18□□□□□ -1.1
TPM4-209ENST00000588483 PLGLAQ15195 96 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 PYHIN1Q6K0P9 492 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 PPP1R27Q86WC6 154 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 ZNF491Q8N8L2 437 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 BEST4Q8NFU0 473 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 MCRIP2Q9BUT9 160 aaKnown RBP8.18□□□□□ -1.1
TPM4-209ENST00000588483 GPR61Q9BZJ8 451 aa8.18□□□□□ -1.1
TPM4-209ENST00000588483 METTL1Q9UBP6 276 aaKnown RBP8.18□□□□□ -1.1
TPM4-209ENST00000588483 IGKV1D-13A0A0B4J2D9 117 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 I3L521 148 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 CCL24O00175 119 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 SLC25A17O43808 307 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 SOX15O60248 233 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 GABARAPO95166 117 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 BRI3O95415 125 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 CA2P00918 260 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 IGKV1-13P0DP09 117 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 NFYAP23511 347 aaPredicted RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 RAB9AP51151 201 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 NCS1P62166 190 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 LSM3P62310 102 aaKnown RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 TMEM267Q0VDI3 215 aaPredicted RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 CBX3Q13185 183 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 MRGPRG-AS1Q2M3A8 158 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 FOXB2Q5VYV0 432 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms