RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SPDEFO95238 335 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 IGKV1-16P04430 117 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 CLEC2LP0C7M8 214 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 HOXD3P31249 432 aaPredicted RBP15.27■□□□□ 0.04
TPM4-208ENST00000588410 LINC00205P59089 165 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 GNG2P59768 71 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 PITPNAQ00169 270 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 OR5M8Q8NGP6 311 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 KLK15Q9H2R5 256 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 RNF167Q9H6Y7 350 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 VCX3AQ9NNX9 186 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 SDHAF2Q9NX18 166 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 VSIG4Q9Y279 399 aa15.27■□□□□ 0.04
TPM4-208ENST00000588410 NOTCH3Q9UM47 2321 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 A0A1W2PN81 502 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 IGLV1-40P01703 118 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 CHRNA7P36544 502 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 NDPQ00604 133 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 TAGLNQ01995 201 aaKnown RBP15.26■□□□□ 0.03
TPM4-208ENST00000588410 IDNKQ5T6J7 187 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 PPP1R27Q86WC6 154 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 TCTEX1D1Q8N7M0 179 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 MINDY2Q8NBR6 621 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 UBE2E2Q96LR5 201 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 DCSTAMPQ9H295 470 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 RHBDL2Q9NX52 303 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 ZMAT5Q9UDW3 170 aaKnown RBP15.26■□□□□ 0.03
TPM4-208ENST00000588410 FOXA2Q9Y261 457 aaPredicted RBP15.26■□□□□ 0.03
TPM4-208ENST00000588410 ETV7Q9Y603 341 aa15.26■□□□□ 0.03
TPM4-208ENST00000588410 IGKV1D-8A0A087WSZ0 117 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 TMEM235A6NFC5 223 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 CA2P00918 260 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 CTXN2P0C2S0 81 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 RAB9AP51151 201 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 SCAND1P57086 179 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 RTL8BQ17RB0 113 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 TIMM50Q3ZCQ8 353 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 ZNF562Q6V9R5 426 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 H1FOOQ8IZA3 346 aaPredicted RBP15.25■□□□□ 0.03
TPM4-208ENST00000588410 ZNF491Q8N8L2 437 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 MYOZ3Q8TDC0 251 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 NUDCD2Q8WVJ2 157 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 FBXO7Q9Y3I1 522 aa15.25■□□□□ 0.03
TPM4-208ENST00000588410 SLC25A17O43808 307 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 CD40LGP29965 261 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 LGALS7P47929 136 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 CRIP2P52943 208 aaPredicted RBP15.24■□□□□ 0.03
TPM4-208ENST00000588410 KRTAP10-11P60412 298 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 EGFEM1PQ0D2K5 195 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 UNQ5815/PRO19632Q6UWF5 114 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 OR11H1Q8NG94 326 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 ADTRPQ96IZ2 230 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 OR5B12Q96R08 314 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 GNB4Q9HAV0 340 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 NUBP2Q9Y5Y2 271 aa15.24■□□□□ 0.03
TPM4-208ENST00000588410 PRKDCP78527 4128 aaKnown RBP15.24■□□□□ 0.03
TPM4-208ENST00000588410 A0A087WXM4 84 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 RRASP10301 218 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 ZNF260Q3ZCT1 412 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 ACTBL2Q562R1 376 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 PYHIN1Q6K0P9 492 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 BVESQ8NE79 360 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 TSPAN14Q8NG11 270 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 OR1N2Q8NGR9 330 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 ARPC1AQ92747 370 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 HARBI1Q96MB7 349 aa15.23■□□□□ 0.03
TPM4-208ENST00000588410 FAM103A1Q9BTL3 118 aaKnown RBP15.23■□□□□ 0.03
TPM4-208ENST00000588410 TRAV18A0A075B6X5 111 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 J3QRK9 145 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 SHOXO15266 292 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 TNFAIP8O95379 198 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 CNIH1O95406 144 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 EGR2P11161 476 aaPredicted RBP15.22■□□□□ 0.03
TPM4-208ENST00000588410 LUMP51884 338 aaPredicted RBP15.22■□□□□ 0.03
TPM4-208ENST00000588410 GNB1P62873 340 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 KIAA0141Q14154 515 aaPredicted RBP15.22■□□□□ 0.03
TPM4-208ENST00000588410 FXYD3Q14802 87 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 AKIRIN2Q53H80 203 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 C19orf54Q5BKX5 351 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 DEFB121Q5J5C9 76 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 CNIH2Q6PI25 160 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 OR5H6Q8NGV6 325 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 GRPEL2Q8TAA5 225 aa15.22■□□□□ 0.03
TPM4-208ENST00000588410 K7EIL1 84 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 TMEM127O75204 238 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 OR8U8P0C7N1 319 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 RUNX1Q01196 453 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 ZNF616Q08AN1 781 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 FHL3Q13643 280 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 C9orf66Q5T8R8 295 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 CROCCP3Q8IVE0 287 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 LFNGQ8NES3 379 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 C5orf30Q96GV9 206 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 DIABLOQ9NR28 239 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 TPSG1Q9NRR2 321 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 OR2W1Q9Y3N9 320 aa15.21■□□□□ 0.03
TPM4-208ENST00000588410 A0A0A6YYH2 397 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 A6NJ64 397 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 SEC14L6B5MCN3 397 aa15.2■□□□□ 0.02
TPM4-208ENST00000588410 I3L521 148 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms