RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 VPREB3Q9UKI3 123 aa8.57□□□□□ -1.04
SMARCA4-213ENST00000587988 BTBD17A6NE02 478 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 PLA2G10O15496 165 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 CHST1O43916 411 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 FAM106CPP0CH98 169 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 PI3P19957 117 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 INPP1P49441 399 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 BRWD1-AS2P59051 145 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 IFITM3Q01628 133 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 HES1Q14469 280 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 MSMO1Q15800 293 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 C16orf87Q6PH81 154 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 BVESQ8NE79 360 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 MARCH1Q8TCQ1 289 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 EAF1Q96JC9 268 aaPredicted RBP8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 RSRP1Q9BUV0 290 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 SLC2A8Q9NY64 477 aa8.56□□□□□ -1.04
SMARCA4-213ENST00000587988 GPR31O00270 319 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 GPR137BO60478 399 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 PGLYRP1O75594 196 aaPredicted RBP8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 IGKV1-16P04430 117 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 PGAM2P15259 253 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 TMEM11P17152 192 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 CNTFRP26992 372 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 BTCP35070 178 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 FAUP35544 74 aaKnown RBP8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 THBS3P49746 956 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 F2RL1P55085 397 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 PHLDA2Q53GA4 152 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 OR2B11Q5JQS5 317 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 SLC38A6Q8IZM9 456 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 Q8N6K4 173 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 OR2T10Q8NGZ9 312 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 AKR1E2Q96JD6 320 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 HSD17B10Q99714 261 aaKnown RBP8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 PRRT1Q99946 306 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 SLC25A33Q9BSK2 321 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 SLC35D1Q9NTN3 355 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 SCP2D1Q9UJQ7 156 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 WASHC3Q9Y3C0 194 aa8.55□□□□□ -1.04
SMARCA4-213ENST00000587988 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 H7C2Y5 167 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 TRIM77I1YAP6 450 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 FCGR3BO75015 233 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 UPK1BO75841 260 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 OR2F2O95006 317 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 MOSP00540 346 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 MC5RP33032 325 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 CCR6P51684 374 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 LPCAT3Q6P1A2 487 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 ZNF66Q6ZN08 573 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 KCTD9Q7L273 389 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 TCTEX1D2Q8WW35 142 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 ADTRPQ96IZ2 230 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 RBM14Q96PK6 669 aaKnown RBP8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 RTBDNQ9BSG5 229 aaPredicted RBP8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 PLSCR3Q9NRY6 295 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 PITPNC1Q9UKF7 332 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 TBC1D24Q9ULP9 559 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 GPR132Q9UNW8 380 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 VSIG4Q9Y279 399 aa8.54□□□□□ -1.04
SMARCA4-213ENST00000587988 SH2D7A6NKC9 451 aaPredicted RBP8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 SRRM4A7MD48 611 aaKnown RBP8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 LYRM1O43325 122 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 RAMP3O60896 148 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 PEX14O75381 377 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 APOA2P02652 100 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 AMY1AP04745 511 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 RLN1P04808 185 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 PIGPP57054 158 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 BLCAPP62952 87 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 RELBQ01201 579 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 Q6ZS46 218 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 TBC1D26Q86UD7 250 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 PDPNQ86YL7 162 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 CMTM1Q8IZ96 169 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 ZFAND1Q8TCF1 268 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 BORCS5Q969J3 196 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 C7orf50Q9BRJ6 194 aaKnown RBP8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 SLC2A9Q9NRM0 540 aa8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 NIPBLQ6KC79 2804 aaeCLIP8.53□□□□□ -1.04
SMARCA4-213ENST00000587988 NAP1L6A6NFF2 107 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 MPPED1O15442 326 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 CRYZL1O95825 349 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 IGLV2-23P01705 113 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 VSIG10L2P0DP72 767 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 ECI1P42126 302 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 RND3P61587 244 aa8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 RPS16P62249 146 aaKnown RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
SMARCA4-213ENST00000587988 CATR1Q13166 79 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms