RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 RCL1Q9Y2P8 373 aaKnown RBP16.77■□□□□ 0.27
ATG4D-204ENST00000586417 A0A1W2PPE3 182 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 ATP6V1G1O75348 118 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 PITX3O75364 302 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 DLX6P56179 175 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 DEFB113Q30KQ7 82 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 RPL39P5Q59GN2 51 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 OR2B11Q5JQS5 317 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 THOC7Q6I9Y2 204 aaKnown RBP16.76■□□□□ 0.27
ATG4D-204ENST00000586417 ODF3L1Q8IXM7 274 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 SPAG16Q8N0X2 631 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 TIMD4Q96H15 378 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 C11orf1Q9H5F2 150 aa16.76■□□□□ 0.27
ATG4D-204ENST00000586417 KANTRA0A1W2PQU2 76 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 HKR1P10072 659 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 NKX2-1P43699 371 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-204ENST00000586417 IZUMO4Q1ZYL8 232 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 TMEM155Q4W5P6 130 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 CXorf66Q5JRM2 361 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-204ENST00000586417 Q6ZRM9 215 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 DMBX1Q8NFW5 382 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 YLPM1P49750 1951 aaKnown RBP16.75■□□□□ 0.27
ATG4D-204ENST00000586417 NOTCH2Q04721 2471 aa16.75■□□□□ 0.27
ATG4D-204ENST00000586417 A0A1B0GU03 582 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 E5RGE8 158 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 IFNA7P01567 189 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 TMEM33P57088 247 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 ID3Q02535 119 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 NCR3LG1Q68D85 454 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 SLC25A48Q6ZT89 311 aaKnown RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 ZNF251Q9BRH9 671 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 NSG2Q9Y328 171 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 SETXQ7Z333 2677 aaKnown RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 TRBV23-1A0A0A0MS06 115 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 M0R1X1 148 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 S1PR2O95136 353 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 P0C879 139 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 NUP62P37198 522 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 HTR2BP41595 481 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 AKR1C2P52895 323 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 ZNF816Q0VGE8 651 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 RAB1CQ92928 201 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 ARPC5LQ9BPX5 153 aa16.74■□□□□ 0.27
ATG4D-204ENST00000586417 BARX1Q9HBU1 254 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 BEX4Q9NWD9 120 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-204ENST00000586417 SAA2-SAA4A0A096LPE2 208 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 KIAA1324LA8MWY0 1029 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-204ENST00000586417 SAA2P0DJI9 122 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-204ENST00000586417 EPHA1P21709 976 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 GNG10P50151 68 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 NDUFA5Q16718 116 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 SLC7A5P1Q8MH63 180 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 NARFLQ9H6Q4 476 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 UBQLN2Q9UHD9 624 aa16.73■□□□□ 0.27
ATG4D-204ENST00000586417 RPL12P30050 165 aaKnown RBP16.72■□□□□ 0.27
ATG4D-204ENST00000586417 GPR6P46095 362 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-204ENST00000586417 PDLIM4P50479 330 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 POLR2GP62487 172 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4D-204ENST00000586417 RNASE11Q8TAA1 199 aaKnown RBP16.72■□□□□ 0.27
ATG4D-204ENST00000586417 ST8SIA2Q92186 375 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 BPESC1Q9GZL8 116 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 PLEKHA2Q9HB19 425 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 CYTL1Q9NRR1 136 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 CACNG5Q9UF02 275 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 MMP24Q9Y5R2 645 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 RAB29O14966 203 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 SPDEFO95238 335 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 UBA52P62987 128 aaKnown RBP16.72■□□□□ 0.27
ATG4D-204ENST00000586417 LYG1Q8N1E2 194 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 C11orf42Q8N5U0 333 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 DDB2Q92466 427 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 FAM168AQ92567 244 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 MBD6Q96DN6 1003 aa16.72■□□□□ 0.27
ATG4D-204ENST00000586417 AKAP9Q99996 3911 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 MALRD1Q5VYJ5 2156 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 GPR37O15354 613 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 P2RY1P47900 373 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 C10orf105Q8TEF2 133 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 ZNF471Q9BX82 626 aaPredicted RBP16.71■□□□□ 0.27
ATG4D-204ENST00000586417 MAGT1Q9H0U3 335 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 ZNRD1Q9P1U0 126 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 MIOXQ9UGB7 285 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 MED13LQ71F56 2210 aa16.71■□□□□ 0.27
ATG4D-204ENST00000586417 RPS10-NUDT3A0A1W2PQS6 291 aa16.7■□□□□ 0.26
ATG4D-204ENST00000586417 F5H0A9 414 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-204ENST00000586417 G6PCP35575 357 aa16.7■□□□□ 0.26
ATG4D-204ENST00000586417 OR8B3Q8NGG8 313 aa16.7■□□□□ 0.26
ATG4D-204ENST00000586417 CD300LFQ8TDQ1 290 aa16.7■□□□□ 0.26
ATG4D-204ENST00000586417 NEIL1Q96FI4 390 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-204ENST00000586417 OR8B2Q96RD0 313 aa16.7■□□□□ 0.26
ATG4D-204ENST00000586417 DOCK11Q5JSL3 2073 aa16.7■□□□□ 0.26
ATG4D-204ENST00000586417 IGHV4-30-2A0A087WSY4 118 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 RBFOX2O43251 390 aaKnown RBP eCLIP16.69■□□□□ 0.26
ATG4D-204ENST00000586417 NXPH3O95157 252 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 KRASP01116 189 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 WDR25Q64LD2 544 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-204ENST00000586417 CLEC2AQ6UVW9 174 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 ALKAL2Q6UX46 152 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 OR8H3Q8N146 312 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms