RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GTSCR1Q86UQ5 136 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 PDPNQ86YL7 162 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 PQLC1Q8N2U9 271 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 BVESQ8NE79 360 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 SETD6Q8TBK2 473 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 TMEM59Q9BXS4 323 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 S100A14Q9HCY8 104 aa8.97□□□□□ -0.97
BRCA1-225ENST00000586385 IRGMA1A4Y4 181 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 BMPR1BO00238 502 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 SOCS1O15524 211 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 OR2A4O95047 310 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 UBBP0CG47 229 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 APELAP0DMC3 54 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 CD300EQ496F6 205 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-225ENST00000586385 DEFB125Q8N687 156 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 ADAD2Q8NCV1 583 aaKnown RBP8.96□□□□□ -0.98
BRCA1-225ENST00000586385 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 NEURL2Q9BR09 285 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 LPAR5Q9H1C0 372 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 CHMP1AQ9HD42 196 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-225ENST00000586385 Q9N2K0 584 aa8.96□□□□□ -0.98
BRCA1-225ENST00000586385 SMPD3Q9NY59 655 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-225ENST00000586385 HERC2O95714 4834 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 EFCAB10A6NFE3 127 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 M0R1X1 148 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 ZBTB25P24278 435 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 TMEM50BP56557 158 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 TAS2R43P59537 309 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 CD81P60033 236 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 ZNF45Q02386 682 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 RNLSQ5VYX0 342 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 FAM89BQ8N5H3 189 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 EDARADDQ8WWZ3 215 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 GFI1Q99684 422 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 SLC35D1Q9NTN3 355 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 ZNF230Q9UIE0 474 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-225ENST00000586385 DMRT1Q9Y5R6 373 aa8.95□□□□□ -0.98
BRCA1-225ENST00000586385 CNIH1O95406 144 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 PRH1P02810 166 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 CD3GP09693 182 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 AADACP22760 399 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 WNT4P56705 351 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 RPEL1Q2QD12 228 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 DEFB114Q30KQ6 69 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 ACSM3Q53FZ2 586 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 ZNF555Q8NEP9 628 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 OR2K2Q8NGT1 345 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 KCNG3Q8TAE7 436 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 USMG5Q96IX5 58 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 TMEM68Q96MH6 324 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 SRD5A3Q9H8P0 318 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 PLEKHJ1Q9NW61 149 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 COA4Q9NYJ1 87 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 RDH8Q9NYR8 311 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 ZNF221Q9UK13 617 aa8.94□□□□□ -0.98
BRCA1-225ENST00000586385 TRBV9A0A0B4J1U6 114 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 MSGN1A6NI15 193 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 TPPPO94811 219 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 APOA2P02652 100 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 MAPK3P27361 379 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-225ENST00000586385 LGALS7P47929 136 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 EWSR1Q01844 656 aaKnown RBP eCLIP8.93□□□□□ -0.98
BRCA1-225ENST00000586385 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 PLAC9Q5JTB6 97 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 LAX1Q8IWV1 398 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 NANOGP1Q8N7R0 232 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 PHYHIPQ92561 330 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 SNAPC3Q92966 411 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 HARBI1Q96MB7 349 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 RIMS4Q9H426 269 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-225ENST00000586385 AKIP1Q9NQ31 210 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 ZC4H2Q9NQZ6 224 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 SDHAF2Q9NX18 166 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 PSORS1C1Q9UIG5 152 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 SELENOKQ9Y6D0 94 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 FRAS1Q86XX4 4008 aa8.93□□□□□ -0.98
BRCA1-225ENST00000586385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.92□□□□□ -0.98
BRCA1-225ENST00000586385 BPNT1O95861 308 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 GNAO1P09471 354 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 OR9G9P0C7N8 305 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 SRMP19623 302 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 RHOGP84095 191 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 PLA2G7Q13093 441 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 MED21Q13503 144 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 EXOSC2Q13868 293 aaKnown RBP8.92□□□□□ -0.98
BRCA1-225ENST00000586385 P2RY14Q15391 338 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 PRSS8Q16651 343 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 RBM48Q5RL73 367 aaKnown RBP8.92□□□□□ -0.98
BRCA1-225ENST00000586385 GLT8D1Q68CQ7 371 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-225ENST00000586385 FBLIM1Q8WUP2 373 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 CYGBQ8WWM9 190 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 DDB2Q92466 427 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 THRSPQ92748 146 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 WDR89Q96FK6 387 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-225ENST00000586385 ARHGAP5-AS1Q96IT6 56 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 OVOL2Q9BRP0 275 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 C12orf4Q9NQ89 552 aa8.92□□□□□ -0.98
BRCA1-225ENST00000586385 FKBP14Q9NWM8 211 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms