RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 DVL1O14640 695 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 RAB29O14966 203 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 LY6G6DO95868 133 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 IGHV2-70P01814 119 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 IGHV3-43DP0DP04 118 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 SELLP14151 372 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 ZNF16P17020 682 aaPredicted RBP8.56□□□□□ -1.04
LIG3-203ENST00000585370 LPAR6P43657 344 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 ID3Q02535 119 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 ZNF585BQ52M93 769 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 Q5PR19 223 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 C8orf31Q8N9H6 132 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 RNASE11Q8TAA1 199 aaKnown RBP8.56□□□□□ -1.04
LIG3-203ENST00000585370 SCARB1Q8WTV0 552 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 TCTEX1D2Q8WW35 142 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 ABHD14AQ9BUJ0 271 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 COA4Q9NYJ1 87 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 OR5AC2Q9NZP5 309 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 LSM5Q9Y4Y9 91 aaKnown RBP8.56□□□□□ -1.04
LIG3-203ENST00000585370 MMP24Q9Y5R2 645 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 COL6A5A8TX70 2615 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
LIG3-203ENST00000585370 A0A1B0GW55 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 GPR137BO60478 399 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 PITX3O75364 302 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 LY86O95711 162 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L2P0CJ85 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L3P0CJ86 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L4P0CJ87 422 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L5P0CJ88 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L6P0CJ89 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L7P0CJ90 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 RPL12P30050 165 aaKnown RBP8.55□□□□□ -1.04
LIG3-203ENST00000585370 THBS3P49746 956 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 AKR1C2P52895 323 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 TAGLNQ01995 201 aaKnown RBP8.55□□□□□ -1.04
LIG3-203ENST00000585370 EXOSC2Q13868 293 aaKnown RBP8.55□□□□□ -1.04
LIG3-203ENST00000585370 LTC4SQ16873 150 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 TMEM200BQ69YZ2 307 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4L9Q6RFH8 374 aaPredicted RBP8.55□□□□□ -1.04
LIG3-203ENST00000585370 PRSS57Q6UWY2 283 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 LYPD2Q6UXB3 125 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 SPAG16Q8N0X2 631 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 FGFRL1Q8N441 504 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 ZNF439Q8NDP4 499 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 STOML3Q8TAV4 291 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 GPR146Q96CH1 333 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 RAB40CQ96S21 281 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 S1PR3Q99500 378 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 GSX2Q9BZM3 304 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 SLC25A31Q9H0C2 315 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 CHODLQ9H9P2 273 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 ZC4H2Q9NQZ6 224 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 DUX4Q9UBX2 424 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 CUBNO60494 3623 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 ARFGEF3Q5TH69 2177 aa8.55□□□□□ -1.04
LIG3-203ENST00000585370 SONP18583 2426 aaKnown RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 TANC2Q9HCD6 1990 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 hCG_1809904A0A1W2PP81 198 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 A0A1W2PPE2 198 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 A0A1W2PR64 198 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 A0A1W2PRV1 198 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 FAM90A9PA6NNJ1 464 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 F5H0A9 414 aaPredicted RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 WRBO00258 174 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 MED6O75586 246 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 SCGB1D2O95969 90 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 HPRT1P00492 218 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 F12P00748 615 aaPredicted RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 IGKV1-39P01597 117 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 RBP4P02753 201 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 IGKV1D-39P04432 117 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 SOD3P08294 240 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 HKR1P10072 659 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 NFYBP25208 207 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 DUTP33316 252 aaKnown RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 VAMP2P63027 116 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 CT45A1Q5HYN5 189 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 CLLU1Q5K131 121 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 EIF5AL1Q6IS14 154 aaKnown RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 FAM71F2Q6NXP2 309 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 TCF23Q7RTU1 214 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 PRIMA1Q86XR5 153 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 FOXRED2Q8IWF2 684 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 OR8H3Q8N146 312 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 LINC00311Q8N616 119 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 OR8B3Q8NGG8 313 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 CT45A3Q8NHU0 189 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 H1FXQ92522 213 aaKnown RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 NEIL1Q96FI4 390 aaPredicted RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 Q96MF0 132 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 OR8B2Q96RD0 313 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 GPHA2Q96T91 129 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 CCL19Q99731 98 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 AIFM2Q9BRQ8 373 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms