RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 H3BQ15 152 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PNRC1Q12796 327 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 HEPN1Q6WQI6 88 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 C11orf53Q8IXP5 236 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TCTEX1D1Q8N7M0 179 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TCTEX1D2Q8WW35 142 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PINX1Q96BK5 328 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 P2RX4Q99571 388 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 UFSP2Q9NUQ7 469 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TMEM242Q9NWH2 141 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ROS1P08922 2347 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 A6NLC8 198 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 AP4M1O00189 453 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 SH2D1BO14796 132 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PSG2P11465 335 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 AKR1C3P42330 323 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 CCL20P78556 96 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 MZT1Q08AG7 82 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ICAM4Q14773 271 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 FIP1L1Q6UN15 594 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF826PQ6ZT77 177 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PUS1Q9Y606 427 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 HSPB6O14558 160 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TGOLN2O43493 480 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 LOXP28300 417 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TESK1Q15569 626 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 SPRNQ5BIV9 151 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TMEM217Q8N7C4 229 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF251Q9BRH9 671 aa12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 CISD1Q9NZ45 108 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-236ENST00000584991 SLC33A1O00400 549 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 UBE2KP61086 200 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 SLC25A24Q6NUK1 477 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ISOC2Q96AB3 205 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
CDK5RAP3-236ENST00000584991 LOC102723971A0A1B0GUV8 181 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PPIHO43447 177 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TNFSF12O43508 249 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IGHV1-46P01743 117 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 EPHA1P21709 976 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 LRRC75BQ2VPJ9 315 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 THNSL2Q86YJ6 484 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 OR13D1Q8NGV5 346 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 MEGF10Q96KG7 1140 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ABHD14AQ9BUJ0 271 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PSENENQ9NZ42 101 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 A0A0G2JRQ6 117 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 OR2H2O95918 312 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ARG1P05089 322 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 DAOP14920 347 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 FABP9Q0Z7S8 132 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 HAGHQ16775 308 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ATP6V1FQ16864 119 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF295-AS1Q8N0V1 137 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 KCNIP1Q9NZI2 227 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 CACNG5Q9UF02 275 aa12.48□□□□□ -0.41
CDK5RAP3-236ENST00000584991 CACNA1DQ01668 2161 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 NXPH2O95156 264 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PTBP3O95758 552 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IGKV1-39P01597 117 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IGKV1D-39P04432 117 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 GLIPR1P48060 266 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TNFAIP6P98066 277 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 HOXA4Q00056 320 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF672Q499Z4 452 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 C5orf24Q7Z6I8 188 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZCCHC24Q8N2G6 241 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IL1F10Q8WWZ1 152 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
CDK5RAP3-236ENST00000584991 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 A0A1W2PR64 198 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 A0A1W2PRV1 198 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 C17orf100A8MU93 164 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IFNA1P01562 189 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 TNFSF4P23510 183 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 DLK1P80370 383 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 RUNX1Q01196 453 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF585BQ52M93 769 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 Q6ZRM9 215 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms