RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 KIAA1456Q9P272 454 aa5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 JPT1Q9UK76 154 aa5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 FOXA2Q9Y261 457 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 MRPS28Q9Y2Q9 187 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 RPL36Q9Y3U8 105 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 PEX16Q9Y5Y5 336 aa5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 ALMS1Q8TCU4 4167 aa5.98□□□□□ -1.45
SMCHD1-210ENST00000583800 TRAV8-7A0A075B6U6 113 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 TRAV34A0A0B4J273 112 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 TRBV5-5A0A0J9YX44 114 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 H3BNX3 289 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 CIB2O75838 187 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 SC5DO75845 299 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 LALBAP00709 142 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 MAS1P04201 325 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 EGR2P11161 476 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 ETV1P50549 477 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 TPPP2P59282 170 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 CX3CL1P78423 397 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 GPR176Q14439 515 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 SMN1Q16637 294 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 CCDC58Q4VC31 144 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 CST9LP1Q5W188 147 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 AWAT2Q6E213 333 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 SIGIRRQ6IA17 410 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 GLDNQ6ZMI3 551 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 RBPMS2Q6ZRY4 209 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 LYPD6Q86Y78 171 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 SGPP2Q8IWX5 399 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 ZFP41Q8N8Y5 198 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 MRPL30Q8TCC3 161 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 SMIM19Q96E16 107 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 MRPS24Q96EL2 167 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 Q96MT0 163 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 MS4A10Q96PG2 267 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 ELOVL1Q9BW60 279 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 SELENOIQ9C0D9 397 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 CST11Q9H112 138 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 IFI27L2Q9H2X8 130 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 KCNIP1Q9NZI2 227 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 GAB2Q9UQC2 676 aa5.97□□□□□ -1.45
SMCHD1-210ENST00000583800 A0A1W2PPK0 400 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 A4D1N5 150 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 FCN1O00602 326 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 RRHO14718 337 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 OGG1O15527 345 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 HSPA12AO43301 675 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 SPRY2O43597 315 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 YPEL1O60688 119 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 CA11O75493 328 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 CRTAPO75718 401 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 IGLV1-51P01701 117 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 HSPB1P04792 205 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 MGMTP16455 207 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 VEGFCP49767 419 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 RASSF2P50749 326 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 RPS11P62280 158 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 PLGLAQ15195 96 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 Q499Y3 187 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 ACTBL2Q562R1 376 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 RPL39P5Q59GN2 51 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF660Q6AZW8 331 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 TMEM88Q6PEY1 159 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 UNQ5815/PRO19632Q6UWF5 114 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 TCTEX1D1Q8N7M0 179 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 OR2AK2Q8NG84 335 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 FAM46BQ96A09 425 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 FLYWCH2Q96CP2 140 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 PGLYRP3Q96LB9 341 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 RDH12Q96NR8 316 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 YPEL2Q96QA6 119 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 OR14A2Q96R54 314 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 CLCC1Q96S66 551 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 FGF20Q9NP95 211 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 CKLFQ9UBR5 152 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 STUB1Q9UNE7 303 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 ERGIC3Q9Y282 383 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 NUBP2Q9Y5Y2 271 aa5.96□□□□□ -1.46
SMCHD1-210ENST00000583800 PNMA8CA0A1B0GUJ8 204 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 LOC100130705A0A1B0GUX0 176 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 PDCD6O75340 191 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 WBP4O75554 376 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 GPX5O75715 221 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 RGS11O94810 467 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CA2P00918 260 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CT45A6P0DMU7 189 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CT45A5P0DMU8 189 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CT45A7P0DMV0 189 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 ARSBP15848 533 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 FUT3P21217 361 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CAMPP49913 170 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 HTD2P86397 168 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 DEFA5Q01523 94 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 TMEM267Q0VDI3 215 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 HMGN3Q15651 99 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CD300EQ496F6 205 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 C6orf141Q5SZD1 244 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 DMKNQ6E0U4 476 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 PYHIN1Q6K0P9 492 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms