RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ZNF57Q68EA5 555 aaPredicted RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 C5orf24Q7Z6I8 188 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 DRAM1Q8N682 238 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 CCDC71LQ8N9Z2 235 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 OR4C16Q8NGL9 310 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 OR4C13Q8NGP0 309 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 OSR1Q8TAX0 266 aaPredicted RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 SECTM1Q8WVN6 248 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 C22orf15Q8WYQ4 148 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 RBM14Q96PK6 669 aaKnown RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 TSNAXQ99598 290 aaKnown RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 SDHCQ99643 169 aaPredicted RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 PARP12Q9H0J9 701 aaKnown RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 RANBP3Q9H6Z4 567 aaPredicted RBP7.49□□□□□ -1.21
UBBP4-201ENST00000583708 HRASLSQ9HDD0 168 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 COPZ2Q9P299 210 aa7.49□□□□□ -1.21
UBBP4-201ENST00000583708 SVEP1Q4LDE5 3571 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 IGKV1D-13A0A0B4J2D9 117 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 H0YJW9 148 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 H3BUX3 64 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 M0QYG6 137 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 ATG12O94817 140 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 VENTXO95231 258 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 SPDEFO95238 335 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 CRYBA1P05813 215 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 CTSDP07339 412 aaPredicted RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 FGF2P09038 288 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 IGKV1-13P0DP09 117 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 RPA2P15927 270 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 UBE2MP61081 183 aaKnown RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 UBA52P62987 128 aaKnown RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 PRB3Q04118 309 aaPredicted RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 EIF4EBP1Q13541 118 aaPredicted RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 BAK1Q16611 211 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 TMEM177Q53S58 311 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 RNASE12Q5GAN4 147 aaKnown RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 FAM53AQ6NSI3 398 aaPredicted RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 MZT2BQ6NZ67 158 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 DYNAPQ8N1N2 210 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 ZDHHC22Q8N966 263 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 OR56B4Q8NH76 319 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 C17orf50Q8WW18 174 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 FLYWCH2Q96CP2 140 aaKnown RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 PALMDQ9NP74 551 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 CCL28Q9NRJ3 127 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 MCUBQ9NWR8 336 aa7.48□□□□□ -1.21
UBBP4-201ENST00000583708 C14orf166Q9Y224 244 aaKnown RBP7.48□□□□□ -1.21
UBBP4-201ENST00000583708 NF1P21359 2839 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 DNAJC9-AS1A6NH13 148 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 CREBL2O60519 120 aaPredicted RBP7.47□□□□□ -1.21
UBBP4-201ENST00000583708 PGLYRP1O75594 196 aaPredicted RBP7.47□□□□□ -1.21
UBBP4-201ENST00000583708 UPK1BO75841 260 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 NDUFA7O95182 113 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 HRASP01112 189 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 IGLV2-14P01704 120 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 IGHV4-59P01825 116 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 PGAM2P15259 253 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 TMEM11P17152 192 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 F2RP25116 425 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 FXYD4P59646 89 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 DEFA1P59665 94 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 DEFA3P59666 94 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 RBMS2Q15434 407 aaKnown RBP7.47□□□□□ -1.21
UBBP4-201ENST00000583708 SCGB2B2Q4G0G5 96 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 ABCA11PQ4W5N1 156 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 RPL39P5Q59GN2 51 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 IDO2Q6ZQW0 420 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 Q8N6K4 173 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 ZNF383Q8NA42 475 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 NPBQ8NG41 125 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 OR51S1Q8NGJ8 323 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 OR4S2Q8NH73 311 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 DDB2Q92466 427 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
UBBP4-201ENST00000583708 TSC22D3Q99576 134 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 MRPL20Q9BYC9 149 aaKnown RBP7.47□□□□□ -1.21
UBBP4-201ENST00000583708 NPFFR1Q9GZQ6 430 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 PLEKHA2Q9HB19 425 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 SLC35D1Q9NTN3 355 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 LIN7CQ9NUP9 197 aaKnown RBP7.47□□□□□ -1.21
UBBP4-201ENST00000583708 CACFD1Q9UGQ2 172 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 GPR132Q9UNW8 380 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 KCNIP3Q9Y2W7 256 aa7.47□□□□□ -1.21
UBBP4-201ENST00000583708 H7C2Y5 167 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 MPPED1O15442 326 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 GPR137BO60478 399 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 TSPAN9O75954 239 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 HPRT1P00492 218 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 IGKV1D-33P01593 117 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 IGKV1-33P01594 117 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 SNRNP70P08621 437 aaKnown RBP7.46□□□□□ -1.22
UBBP4-201ENST00000583708 REG1BP48304 166 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 TAS2R31P59538 309 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 DHODHQ02127 395 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 ASAH1Q13510 395 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 DIAPH2-AS1Q14236 149 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 HES1Q14469 280 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 ZNF818PQ6ZRF7 136 aa7.46□□□□□ -1.22
UBBP4-201ENST00000583708 TEX45Q8NA69 505 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms