RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OR2B11Q5JQS5 317 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 LYG1Q8N1E2 194 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 DMBX1Q8NFW5 382 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 OR8B3Q8NGG8 313 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 OR4D5Q8NGN0 318 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 GPR146Q96CH1 333 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 OR8B2Q96RD0 313 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 CITED4Q96RK1 184 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 RAB40CQ96S21 281 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 TMEM204Q9BSN7 226 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 PARP12Q9H0J9 701 aaKnown RBP7.68□□□□□ -1.18
SS18-220ENST00000582092 SLC25A32Q9H2D1 315 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.68□□□□□ -1.18
SS18-220ENST00000582092 SDHAF2Q9NX18 166 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 DCAF16Q9NXF7 216 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 MIOXQ9UGB7 285 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 CACFD1Q9UGQ2 172 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 MMP24Q9Y5R2 645 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 SESN1Q9Y6P5 492 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 TACC2O95359 2948 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 TRBV23-1A0A0A0MS06 115 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 TOR1AO14656 332 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 GPR37O15354 613 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 SIAH2O43255 324 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 KCNAB3O43448 404 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 CHST1O43916 411 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 FCGR3BO75015 233 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 NXPH3O95157 252 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 HPRT1P00492 218 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 CFDP00746 253 aaPredicted RBP7.67□□□□□ -1.18
SS18-220ENST00000582092 IGHV3-7P01780 117 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 HKR1P10072 659 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 FOSL1P15407 271 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 THBS3P49746 956 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 POLR2GP62487 172 aaKnown RBP eCLIP7.67□□□□□ -1.18
SS18-220ENST00000582092 C17orf58Q2M2W7 97 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 NMSQ5H8A3 153 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 PRAMEF5Q5TYX0 476 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 SLC25A24Q6NUK1 477 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 LYPD2Q6UXB3 125 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 STX12Q86Y82 276 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 BAP18Q8IXM2 172 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 FGFRL1Q8N441 504 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 OR2C3Q8N628 320 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 AIFM2Q9BRQ8 373 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 SMIM3Q9BZL3 60 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 MAGT1Q9H0U3 335 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 KAAG1Q9UBP8 84 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 CACNG5Q9UF02 275 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 GAB2Q9UQC2 676 aa7.67□□□□□ -1.18
SS18-220ENST00000582092 A0A1W2PPR1 153 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 FAM90A26D6RGX4 464 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 G6PCP35575 357 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 PRRX1P54821 245 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 TMEM33P57088 247 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 LOXL3P58215 753 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
SS18-220ENST00000582092 ID3Q02535 119 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 RTL8BQ17RB0 113 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 CXorf66Q5JRM2 361 aaPredicted RBP7.66□□□□□ -1.18
SS18-220ENST00000582092 TMEM200BQ69YZ2 307 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 DUX4L9Q6RFH8 374 aaPredicted RBP7.66□□□□□ -1.18
SS18-220ENST00000582092 PRSS57Q6UWY2 283 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 OR10X1Q8NGY0 326 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 OR4A16Q8NH70 328 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 OR4S2Q8NH73 311 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 R3HDM4Q96D70 268 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 RPUSD1Q9UJJ7 312 aaKnown RBP7.66□□□□□ -1.18
SS18-220ENST00000582092 PLCE1Q9P212 2302 aa7.66□□□□□ -1.18
SS18-220ENST00000582092 A0A1W2PPE3 182 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 LINC00862A6NCI5 91 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 FAM24AA6NFZ4 105 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 CEBPZOSA8MTT3 80 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 C17orf98A8MV24 154 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 LYNX1G3V0Z9 82 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 SYNGR2O43760 224 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 FSTL3O95633 263 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 LY86O95711 162 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 HRASP01112 189 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 IFNA5P01569 189 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 IGLV2-14P01704 120 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 APOA2P02652 100 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 CGB3P0DN86 165 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 CGB7P0DN87 165 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 LYNX1P0DP58 116 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 RRASP10301 218 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 LOXP28300 417 aaPredicted RBP7.65□□□□□ -1.18
SS18-220ENST00000582092 DUTP33316 252 aaKnown RBP7.65□□□□□ -1.18
SS18-220ENST00000582092 TAGLNQ01995 201 aaKnown RBP7.65□□□□□ -1.18
SS18-220ENST00000582092 ZNF266Q14584 549 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 ZNF585BQ52M93 769 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 AVPI1Q5T686 147 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 USF3Q68DE3 2245 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 HEPN1Q6WQI6 88 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 COMMD7Q86VX2 200 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 OR1S2Q8NGQ3 325 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 STOML3Q8TAV4 291 aa7.65□□□□□ -1.18
SS18-220ENST00000582092 SCGB1C1Q8TD33 95 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms