RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC6A1P30531 599 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 DUTP33316 252 aaKnown RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 BTCP35070 178 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 IER3P46695 156 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 FXYD4P59646 89 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 DEFA1P59665 94 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 DEFA3P59666 94 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 RPL15P61313 204 aaKnown RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 FAAP20Q6NZ36 180 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 RBMS3Q6XE24 437 aaKnown RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 ZNF818PQ6ZRF7 136 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 Q71RC1 249 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 PDPNQ86YL7 162 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 BCL6BQ8N143 479 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 ZNF418Q8TF45 676 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 C17orf50Q8WW18 174 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 DDB2Q92466 427 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 C5orf30Q96GV9 206 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 RNF5Q99942 180 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 ABCB10Q9NRK6 738 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 PITPNC1Q9UKF7 332 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 TBC1D24Q9ULP9 559 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 GPR132Q9UNW8 380 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 HILPDAQ9Y5L2 63 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 RNF212BA8MTL3 300 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 H0YJW9 148 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 TIMM23O14925 209 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 FAM106CPP0CH98 169 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 KIR2DS2P43631 304 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 HILS1P60008 231 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 IFITM3Q01628 133 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 CATR1Q13166 79 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 DIAPH2-AS1Q14236 149 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 SCGB2B2Q4G0G5 96 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 RPL39P5Q59GN2 51 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 MZT2BQ6NZ67 158 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 KCTD9Q7L273 389 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 C16orf82Q7Z2V1 217 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 CCDC71LQ8N9Z2 235 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 OR8H1Q8NGG4 311 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 PIFOQ8TCI5 191 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 CD300LFQ8TDQ1 290 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 SSX3Q99909 188 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 MRPL20Q9BYC9 149 aaKnown RBP8.36□□□□□ -1.07
CCDC47-203ENST00000580986 CCL28Q9NRJ3 127 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 SLC2A9Q9NRM0 540 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 RNF150Q9ULK6 438 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 PRELID3BQ9Y3B1 194 aa8.36□□□□□ -1.07
CCDC47-203ENST00000580986 BTBD17A6NE02 478 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 M0R1X1 148 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 NDUFB6O95139 128 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 VENTXO95231 258 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 APOA2P02652 100 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
CCDC47-203ENST00000580986 RTL8BQ17RB0 113 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 C16orf87Q6PH81 154 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 CADM3Q8N126 398 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 Q8N6K4 173 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 SIGLECL1Q8N7X8 197 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 OR4C13Q8NGP0 309 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 C22orf15Q8WYQ4 148 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 C5orf66Q9H5L9 145 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 RAB18Q9NP72 206 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
CCDC47-203ENST00000580986 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 C14orf166Q9Y224 244 aaKnown RBP8.35□□□□□ -1.07
CCDC47-203ENST00000580986 TCF19Q9Y242 345 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 WASHC3Q9Y3C0 194 aa8.35□□□□□ -1.07
CCDC47-203ENST00000580986 PIGBOS1A0A0B4J2F0 54 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 MDFIC2A0A1B0GVS7 189 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 LINC00473A8K010 186 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 PGLYRP1O75594 196 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-203ENST00000580986 IFNA2P01563 188 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 PGAM2P15259 253 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 F2RP25116 425 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 REG1BP48304 166 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 MECP2P51608 486 aaKnown RBP8.34□□□□□ -1.07
CCDC47-203ENST00000580986 PIGPP57054 158 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 CBX3Q13185 183 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 DCTN2Q13561 401 aaKnown RBP8.34□□□□□ -1.07
CCDC47-203ENST00000580986 ABCA11PQ4W5N1 156 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 MOB3BQ86TA1 216 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 POC5Q8NA72 575 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 DUSP18Q8NEJ0 188 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 OR2T10Q8NGZ9 312 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 ZFAND2BQ8WV99 257 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 GALNT14Q96FL9 552 aa8.34□□□□□ -1.07
CCDC47-203ENST00000580986 RTBDNQ9BSG5 229 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-203ENST00000580986 ALX4Q9H161 411 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-203ENST00000580986 SOX21Q9Y651 276 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-203ENST00000580986 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 A6NDX4 124 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 H0Y980 276 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 H3BUX3 64 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 M0QZK8 103 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms