RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 S1PR2O95136 353 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 IGHV4-39P01824 125 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 RLN2P04090 185 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 PET100P0DJ07 73 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 IGHV1-8P0DP01 117 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 C4BPBP20851 252 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 AKR1C2P52895 323 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 GNB2P62879 340 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 OR2F1Q13607 317 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 IZUMO4Q1ZYL8 232 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 SP5Q6BEB4 398 aaPredicted RBP8.61□□□□□ -1.03
SS18-217ENST00000580958 ACOT7LQ6ZUV0 252 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 ZNF525Q8N782 197 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 INO80EQ8NBZ0 244 aaPredicted RBP8.61□□□□□ -1.03
SS18-217ENST00000580958 CLEC18CQ8NCF0 446 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 C8orf46Q8TAG6 207 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 RRNAD1Q96FB5 475 aaKnown RBP8.61□□□□□ -1.03
SS18-217ENST00000580958 ZNF251Q9BRH9 671 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 FAM212BQ9NTI7 297 aaPredicted RBP8.61□□□□□ -1.03
SS18-217ENST00000580958 SESN1Q9Y6P5 492 aa8.61□□□□□ -1.03
SS18-217ENST00000580958 PPIAL4CA0A0B4J2A2 164 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 FCGR3BO75015 233 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 DEDDO75618 318 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 NXPH3O95157 252 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 PPIAL4GP0DN37 164 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 NUP62P37198 522 aaPredicted RBP8.6□□□□□ -1.03
SS18-217ENST00000580958 NKX2-1P43699 371 aaPredicted RBP8.6□□□□□ -1.03
SS18-217ENST00000580958 THBS3P49746 956 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 PDLIM4P50479 330 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 ZNF345Q14585 488 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 Q6ZRM9 215 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 C11orf42Q8N5U0 333 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 LINC00311Q8N616 119 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 LY6G5BQ8NDX9 201 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 OR8H1Q8NGG4 311 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 S1PR3Q99500 378 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 SSBP3Q9BWW4 388 aaPredicted RBP8.6□□□□□ -1.03
SS18-217ENST00000580958 TMEM133Q9H2Q1 129 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 ZFP57Q9NU63 452 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 CACNG5Q9UF02 275 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 POMT1Q9Y6A1 747 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 ABCA2Q9BZC7 2435 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 MED13LQ71F56 2210 aa8.6□□□□□ -1.03
SS18-217ENST00000580958 A0A087X0M5 115 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 A0A1B0GU03 582 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 A0A1B0GX30 115 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 A0A1W2PPH5 198 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 MSGN1A6NI15 193 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 E5RGE8 158 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 J3QR06 171 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 ST8SIA3O43173 380 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 BCL2L11O43521 198 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 PITX3O75364 302 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 KRASP01116 189 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 LIPFP07098 398 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 SLC25A6P12236 298 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 G6PCP35575 357 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 KIR2DS2P43631 304 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 DLX1P56177 255 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 CXorf66Q5JRM2 361 aaPredicted RBP8.59□□□□□ -1.03
SS18-217ENST00000580958 ZNF833PQ6ZTB9 187 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 C8orf31Q8N9H6 132 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 OR9G1Q8NH87 305 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 ZNF596Q8TC21 504 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 CD300LFQ8TDQ1 290 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 DDB2Q92466 427 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 R3HDM4Q96D70 268 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 ADTRPQ96IZ2 230 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 MAGT1Q9H0U3 335 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 ONECUT1Q9UBC0 465 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 NSG2Q9Y328 171 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 PRELID3BQ9Y3B1 194 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 MMP24Q9Y5R2 645 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 DOPEY2Q9Y3R5 2298 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 SPG11Q96JI7 2443 aa8.59□□□□□ -1.03
SS18-217ENST00000580958 LOC105371242A0A075B767 164 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 RBFOX2O43251 390 aaKnown RBP eCLIP8.58□□□□□ -1.04
SS18-217ENST00000580958 SSSCA1O60232 199 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 ATG12O94817 140 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 HPRT1P00492 218 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 CFDP00746 253 aaPredicted RBP8.58□□□□□ -1.04
SS18-217ENST00000580958 IGHV2-5P01817 119 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 RBP4P02753 201 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 P0C879 139 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 HKR1P10072 659 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 POLR2GP62487 172 aaKnown RBP eCLIP8.58□□□□□ -1.04
SS18-217ENST00000580958 ID3Q02535 119 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 PRB3Q04118 309 aaPredicted RBP8.58□□□□□ -1.04
SS18-217ENST00000580958 ZNF767PQ75MW2 155 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 ZNF295-AS1Q8N0V1 137 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 ABHD12Q8N2K0 398 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 ZNF383Q8NA42 475 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 NRGNQ92686 78 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 AQP10Q96PS8 301 aa8.58□□□□□ -1.04
SS18-217ENST00000580958 MRPL20Q9BYC9 149 aaKnown RBP8.58□□□□□ -1.04
SS18-217ENST00000580958 BPESC1Q9GZL8 116 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms