RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 SOX15O60248 233 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 DTYMKP23919 212 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
PMP22-208ENST00000580584 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
PMP22-208ENST00000580584 C19orf54Q5BKX5 351 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 HACD4Q5VWC8 232 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 TMEM65Q6PI78 240 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 PDPNQ86YL7 162 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 MINDY2Q8NBR6 621 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
PMP22-208ENST00000580584 ST6GALNAC5Q9BVH7 336 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.09□□□□□ -0.47
PMP22-208ENST00000580584 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
PMP22-208ENST00000580584 A0A1W2PN81 502 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 K7EIL1 84 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 SLC25A17O43808 307 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 DIRAS3O95661 229 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 CA2P00918 260 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 EGR2P11161 476 aaPredicted RBP12.08□□□□□ -0.48
PMP22-208ENST00000580584 CHRNA7P36544 502 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 EGFEM1PQ0D2K5 195 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 ARL6IP1Q15041 203 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
PMP22-208ENST00000580584 IDNKQ5T6J7 187 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
PMP22-208ENST00000580584 Q6ZS49 121 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 H1FOOQ8IZA3 346 aaPredicted RBP12.08□□□□□ -0.48
PMP22-208ENST00000580584 OR5H6Q8NGV6 325 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 DPF1Q92782 380 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
PMP22-208ENST00000580584 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 TSNAXQ99598 290 aaKnown RBP12.08□□□□□ -0.48
PMP22-208ENST00000580584 RNF5Q99942 180 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 RHBDL2Q9NX52 303 aa12.08□□□□□ -0.48
PMP22-208ENST00000580584 RBM7Q9Y580 266 aaKnown RBP12.08□□□□□ -0.48
PMP22-208ENST00000580584 WI2-2373I1.2A0A1W2PRP0 233 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 J3QRK9 145 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 SSX5O60225 188 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 SPDEFO95238 335 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 TGFBR1P36897 503 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 RAB9AP51151 201 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 LUMP51884 338 aaPredicted RBP12.07□□□□□ -0.48
PMP22-208ENST00000580584 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
PMP22-208ENST00000580584 GNG2P59768 71 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 GNB1P62873 340 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 OR11H1Q8NG94 326 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 UBE2E2Q96LR5 201 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 MCRIP2Q9BUT9 160 aaKnown RBP12.07□□□□□ -0.48
PMP22-208ENST00000580584 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
PMP22-208ENST00000580584 VSIG4Q9Y279 399 aa12.07□□□□□ -0.48
PMP22-208ENST00000580584 SCGNO76038 276 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 NFYAP23511 347 aaPredicted RBP12.06□□□□□ -0.48
PMP22-208ENST00000580584 FHL3Q13643 280 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 PPP1R27Q86WC6 154 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 BVESQ8NE79 360 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 OR5M8Q8NGP6 311 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 GRPEL2Q8TAA5 225 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 ARPC1AQ92747 370 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 HARBI1Q96MB7 349 aa12.06□□□□□ -0.48
PMP22-208ENST00000580584 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
PMP22-208ENST00000580584 I3L521 148 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 ARPC1BO15143 372 aaKnown RBP12.05□□□□□ -0.48
PMP22-208ENST00000580584 IGLV2-23P01705 113 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 SSBP2P81877 361 aaPredicted RBP12.05□□□□□ -0.48
PMP22-208ENST00000580584 PJVKQ0ZLH3 352 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 ASPHD1Q5U4P2 390 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 ZNF562Q6V9R5 426 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 LFNGQ8NES3 379 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 TSPAN14Q8NG11 270 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 NUBP2Q9Y5Y2 271 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 ETV7Q9Y603 341 aa12.05□□□□□ -0.48
PMP22-208ENST00000580584 TRAV18A0A075B6X5 111 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 LINC00473A8K010 186 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 DUTP33316 252 aaKnown RBP12.04□□□□□ -0.48
PMP22-208ENST00000580584 PITPNAQ00169 270 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 CBX3Q13185 183 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 FXYD3Q14802 87 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 RTL8BQ17RB0 113 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 ACTBL2Q562R1 376 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 TCTEX1D1Q8N7M0 179 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 OR1N2Q8NGR9 330 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 DDB2Q92466 427 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 MS4A10Q96PG2 267 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 DCSTAMPQ9H295 470 aa12.04□□□□□ -0.48
PMP22-208ENST00000580584 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 SRRM4A7MD48 611 aaKnown RBP12.03□□□□□ -0.48
PMP22-208ENST00000580584 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 SHOXO15266 292 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 TNFAIP8O95379 198 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 CRYGBP07316 175 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 SCAND1P57086 179 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 LSM3P62310 102 aaKnown RBP12.03□□□□□ -0.48
PMP22-208ENST00000580584 RUNX1Q01196 453 aa12.03□□□□□ -0.48
PMP22-208ENST00000580584 ZNF616Q08AN1 781 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms