RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 PLGLAQ15195 96 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 NEDD8Q15843 81 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 DEFB136Q30KP8 78 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 ZNF562Q6V9R5 426 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 ZNF491Q8N8L2 437 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 FLYWCH2Q96CP2 140 aaKnown RBP17.9■□□□□ 0.46
VAPA-205ENST00000578314 TSNAXQ99598 290 aaKnown RBP17.9■□□□□ 0.46
VAPA-205ENST00000578314 OR2D2Q9H210 308 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 DCSTAMPQ9H295 470 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 METTL1Q9UBP6 276 aaKnown RBP17.9■□□□□ 0.46
VAPA-205ENST00000578314 NUBP2Q9Y5Y2 271 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 SPDEFO95238 335 aa17.89■□□□□ 0.45
VAPA-205ENST00000578314 CLEC2LP0C7M8 214 aa17.89■□□□□ 0.45
VAPA-205ENST00000578314 RAB9AP51151 201 aa17.89■□□□□ 0.45
VAPA-205ENST00000578314 SCAND1P57086 179 aa17.89■□□□□ 0.45
VAPA-205ENST00000578314 H1FOOQ8IZA3 346 aaPredicted RBP17.89■□□□□ 0.45
VAPA-205ENST00000578314 LGALS14Q8TCE9 139 aa17.89■□□□□ 0.45
VAPA-205ENST00000578314 GINS4Q9BRT9 223 aa17.89■□□□□ 0.45
VAPA-205ENST00000578314 LOC100506127A0A0U1RQW1 187 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 HOXD3P31249 432 aaPredicted RBP17.88■□□□□ 0.45
VAPA-205ENST00000578314 PITPNAQ00169 270 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 RUNX1Q01196 453 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 MXD1Q05195 221 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 FHL3Q13643 280 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 ZNF260Q3ZCT1 412 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 TCTEX1D1Q8N7M0 179 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 C5orf30Q96GV9 206 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 SLC35D1Q9NTN3 355 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 VSIG4Q9Y279 399 aa17.88■□□□□ 0.45
VAPA-205ENST00000578314 I3L521 148 aa17.87■□□□□ 0.45
VAPA-205ENST00000578314 LGALS7P47929 136 aa17.87■□□□□ 0.45
VAPA-205ENST00000578314 TAGLNQ01995 201 aaKnown RBP17.87■□□□□ 0.45
VAPA-205ENST00000578314 TMEM267Q0VDI3 215 aaPredicted RBP17.87■□□□□ 0.45
VAPA-205ENST00000578314 DPF1Q92782 380 aa17.87■□□□□ 0.45
VAPA-205ENST00000578314 CLCC1Q96S66 551 aa17.87■□□□□ 0.45
VAPA-205ENST00000578314 ST6GALNAC5Q9BVH7 336 aa17.87■□□□□ 0.45
VAPA-205ENST00000578314 RHBDL2Q9NX52 303 aa17.87■□□□□ 0.45
VAPA-205ENST00000578314 K7EIL1 84 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 SOX15O60248 233 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 CTXN2P0C2S0 81 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 ECSCRQ19T08 205 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 AKIRIN2Q53H80 203 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 PPP1R27Q86WC6 154 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 OR5M8Q8NGP6 311 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 GNB4Q9HAV0 340 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 FOXA2Q9Y261 457 aaPredicted RBP17.86■□□□□ 0.45
VAPA-205ENST00000578314 RBM7Q9Y580 266 aaKnown RBP17.86■□□□□ 0.45
VAPA-205ENST00000578314 ETV7Q9Y603 341 aa17.86■□□□□ 0.45
VAPA-205ENST00000578314 A0A1W2PN81 502 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 TMEM235A6NFC5 223 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 CA2P00918 260 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 IGLV2-23P01705 113 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 CHRNA7P36544 502 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 RAB25P57735 213 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 OR11H1Q8NG94 326 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 OR5H6Q8NGV6 325 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 NUDCD2Q8WVJ2 157 aa17.85■□□□□ 0.45
VAPA-205ENST00000578314 SLC25A17O43808 307 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 SSX5O60225 188 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 TMEM127O75204 238 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 CRYGBP07316 175 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 TMEM177Q53S58 311 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 IDNKQ5T6J7 187 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 OR1N2Q8NGR9 330 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 ABHD5Q8WTS1 349 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 DDB2Q92466 427 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 SLC25A38Q96DW6 304 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 ADTRPQ96IZ2 230 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 FAM103A1Q9BTL3 118 aaKnown RBP17.84■□□□□ 0.45
VAPA-205ENST00000578314 A3GALT2U3KPV4 340 aa17.84■□□□□ 0.45
VAPA-205ENST00000578314 WI2-2373I1.2A0A1W2PRP0 233 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 RRASP10301 218 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 DUTP33316 252 aaKnown RBP17.83■□□□□ 0.44
VAPA-205ENST00000578314 GNG2P59768 71 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 TIMM50Q3ZCQ8 353 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 PYHIN1Q6K0P9 492 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 CNIH2Q6PI25 160 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 BVESQ8NE79 360 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 LFNGQ8NES3 379 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 TPSG1Q9NRR2 321 aa17.83■□□□□ 0.44
VAPA-205ENST00000578314 ZMAT5Q9UDW3 170 aaKnown RBP17.83■□□□□ 0.44
VAPA-205ENST00000578314 A0A087WXM4 84 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 A0A0A6YYH2 397 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 A6NJ64 397 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 ARPC1BO15143 372 aaKnown RBP17.82■□□□□ 0.44
VAPA-205ENST00000578314 HLA-DQB1P01920 261 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 LUMP51884 338 aaPredicted RBP17.82■□□□□ 0.44
VAPA-205ENST00000578314 CBX3Q13185 183 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 FXYD3Q14802 87 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 RTL8BQ17RB0 113 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 ACTBL2Q562R1 376 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 UNQ5815/PRO19632Q6UWF5 114 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 TSPAN14Q8NG11 270 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 ARPC1AQ92747 370 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 OR2W1Q9Y3N9 320 aa17.82■□□□□ 0.44
VAPA-205ENST00000578314 SRRM4A7MD48 611 aaKnown RBP17.81■□□□□ 0.44
VAPA-205ENST00000578314 TNFAIP8O95379 198 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 OR8U8P0C7N1 319 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 GNB1P62873 340 aa17.81■□□□□ 0.44
VAPA-205ENST00000578314 SSBP2P81877 361 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms