RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 GNB1P62873 340 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 PLGLAQ15195 96 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 C11orf87Q6NUJ2 197 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 PPP1R27Q86WC6 154 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 RHOVQ96L33 236 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 HDHD3Q9BSH5 251 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
SMARCE1-213ENST00000578044 A0A0G2JLM5 398 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 TMEM272A0A1B0GTI8 110 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 MFNGO00587 321 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 FCN1O00602 326 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 CRYGBP07316 175 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 FCGR3AP08637 254 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 CD3GP09693 182 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 OR8U9P0C7N5 309 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 DTYMKP23919 212 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 FGF9P31371 208 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 GABARAPL2P60520 117 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 OR10R2Q8NGX6 335 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 DCUN1D4Q92564 292 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 CCDC90BQ9GZT6 254 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 U3KQK5 164 aa11.2□□□□□ -0.62
SMARCE1-213ENST00000578044 SCGNO76038 276 aa11.19□□□□□ -0.62
SMARCE1-213ENST00000578044 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-213ENST00000578044 RPS16P62249 146 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-213ENST00000578044 ECSCRQ19T08 205 aa11.19□□□□□ -0.62
SMARCE1-213ENST00000578044 OR6Q1Q8NGQ2 317 aa11.19□□□□□ -0.62
SMARCE1-213ENST00000578044 YTHDF1Q9BYJ9 559 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-213ENST00000578044 DNAH7Q8WXX0 4024 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 SLC22A5O76082 557 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 CA2P00918 260 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 RAB3BP20337 219 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 ZP3P21754 424 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 AADACP22760 399 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 MYL9P24844 172 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 CLDN12P56749 244 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 CBX3Q13185 183 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 RBMXL1Q96E39 390 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 DCSTAMPQ9H295 470 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 SLC35D1Q9NTN3 355 aa11.18□□□□□ -0.62
SMARCE1-213ENST00000578044 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 ANKRD65E5RJM6 399 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 M0R1X1 148 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 TMEM127O75204 238 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 MAP2K4P45985 399 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 SCAND1P57086 179 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 PITPNAQ00169 270 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 FXYD3Q14802 87 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 RTL8BQ17RB0 113 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 UBE2UQ5VVX9 321 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 TPRA1Q86W33 373 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 POC5Q8NA72 575 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 OSR1Q8TAX0 266 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 DDB2Q92466 427 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 FCGR1BQ92637 280 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 PRR25Q96S07 402 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 SDHAF2Q9NX18 166 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
SMARCE1-213ENST00000578044 A8MZ25 164 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 SLC25A17O43808 307 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 TPPP2P59282 170 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 IGSF11Q5DX21 431 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 HES5Q5TA89 166 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 DRAXINQ8NBI3 349 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
SMARCE1-213ENST00000578044 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 A0A087WW49 117 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 SHISA3A0PJX4 238 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 NOTOA8MTQ0 251 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 C3orf84H3BNL1 204 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 CREBL2O60519 120 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 GSTT2P0CG29 244 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 UBE2KP61086 200 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 ABHD5Q8WTS1 349 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 OR5B12Q96R08 314 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms