RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ZFP30Q9Y2G7 519 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 POLDIP2Q9Y2S7 368 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
RNF43-202ENST00000577625 A0A1B0GU03 582 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 M0R1B8 84 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 MLNRO43193 412 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 IRF2P14316 349 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 GLRA1P23415 457 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 ZNF718Q3SXZ3 478 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 MBNL2Q5VZF2 373 aaKnown RBP11.62□□□□□ -0.55
RNF43-202ENST00000577625 Q6ZPA2 131 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 Q6ZS49 121 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 C22orf34Q6ZV56 151 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 MRPL41Q8IXM3 137 aaKnown RBP11.62□□□□□ -0.55
RNF43-202ENST00000577625 Q8IYB0 196 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 SCCPDHQ8NBX0 429 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 ZNF2Q9BSG1 426 aaPredicted RBP11.62□□□□□ -0.55
RNF43-202ENST00000577625 CABLES2Q9BTV7 478 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 FZR1Q9UM11 496 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 NAPSAO96009 420 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 ZNF154Q13106 437 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
RNF43-202ENST00000577625 SRSF7Q16629 238 aaKnown RBP eCLIP11.62□□□□□ -0.557e-7■■■■□ 22.3
RNF43-202ENST00000577625 TPRP12270 2363 aaKnown RBP11.62□□□□□ -0.55
RNF43-202ENST00000577625 SCGB1D2O95969 90 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 OR10J1P30954 320 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 FABP6P51161 128 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 ERVK11-1P61568 191 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 RBPJQ06330 500 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 OR5I1Q13606 314 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 MSMPQ1L6U9 139 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 Q6ZR03 302 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 CTDSP1Q9GZU7 261 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 DNAJC4Q9NNZ3 241 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 FKBP11Q9NYL4 201 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
RNF43-202ENST00000577625 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
RNF43-202ENST00000577625 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 DUSP1P28562 367 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 GCH1P30793 250 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 KLRB1Q12918 225 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 RNASE8Q8TDE3 154 aaKnown RBP11.61□□□□□ -0.55
RNF43-202ENST00000577625 RBMXL1Q96E39 390 aaKnown RBP11.61□□□□□ -0.55
RNF43-202ENST00000577625 LIME1Q9H400 295 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 JKAMPQ9P055 326 aa11.61□□□□□ -0.55
RNF43-202ENST00000577625 C14orf166Q9Y224 244 aaKnown RBP11.61□□□□□ -0.55
RNF43-202ENST00000577625 SP5Q6BEB4 398 aaPredicted RBP11.6□□□□□ -0.55
RNF43-202ENST00000577625 GSX1Q9H4S2 264 aaPredicted RBP11.6□□□□□ -0.55
RNF43-202ENST00000577625 ELOVL5Q9NYP7 299 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 ITPR1Q14643 2758 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 CDIPTO14735 213 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 HPRT1P00492 218 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 CRYAAP02489 173 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 MBPP02686 304 aaPredicted RBP11.6□□□□□ -0.55
RNF43-202ENST00000577625 CTSDP07339 412 aaPredicted RBP11.6□□□□□ -0.55
RNF43-202ENST00000577625 COL5A1-AS1Q5SY13 56 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 TGIF2LYQ8IUE0 185 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 OR2G3Q8NGZ4 309 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 ZCCHC14Q8WYQ9 949 aaKnown RBP11.6□□□□□ -0.55
RNF43-202ENST00000577625 MIEN1Q9BRT3 115 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 Q9N2K0 584 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 NAGKQ9UJ70 344 aa11.6□□□□□ -0.55
RNF43-202ENST00000577625 COL6A6A6NMZ7 2263 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 PKD1L2Q7Z442 2459 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 TRAV24A0A0B4J272 114 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 HNF1AP20823 631 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 MDKP21741 143 aaPredicted RBP11.59□□□□□ -0.55
RNF43-202ENST00000577625 LEMD1Q68G75 181 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 Q6P435 159 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 PYGO2Q9BRQ0 406 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 ROS1P08922 2347 aa11.59□□□□□ -0.55
RNF43-202ENST00000577625 HSPB6O14558 160 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 KNG1P01042 644 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 GRPP07492 148 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 TMEM11P17152 192 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 ELLP55199 621 aaPredicted RBP11.58□□□□□ -0.56
RNF43-202ENST00000577625 VAMP2P63027 116 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 TMEM241Q24JQ0 296 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 ETFRF1Q6IPR1 90 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 CLDND2Q8NHS1 167 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 TMEM170AQ8WVE7 144 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 MRPL24Q96A35 216 aaKnown RBP11.58□□□□□ -0.56
RNF43-202ENST00000577625 VKORC1Q9BQB6 163 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 C20orf144Q9BQM9 153 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 RCL1Q9Y2P8 373 aaKnown RBP11.58□□□□□ -0.56
RNF43-202ENST00000577625 TRBV6-6A0A0A6YYG2 114 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 C16orf97H3BN30 126 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 DIRAS3O95661 229 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 HBE1P02100 147 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 SELENOTP62341 195 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 RPL23AP62750 156 aaKnown RBP11.58□□□□□ -0.56
RNF43-202ENST00000577625 ZNF266Q14584 549 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 ZNF146Q15072 292 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
RNF43-202ENST00000577625 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms