RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 OR5B12Q96R08 314 aa12.11□□□□□ -0.47
SF3B3-215ENST00000577085 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
SF3B3-215ENST00000577085 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
SF3B3-215ENST00000577085 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
SF3B3-215ENST00000577085 FCN1O00602 326 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 CNIH1O95406 144 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 CA2P00918 260 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 OR8U8P0C7N1 319 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 DTYMKP23919 212 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 SDC2P34741 201 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 GNG2P59768 71 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 PITPNAQ00169 270 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
SF3B3-215ENST00000577085 MXD1Q05195 221 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
SF3B3-215ENST00000577085 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 PYHIN1Q6K0P9 492 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 SFXN4Q6P4A7 337 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 UNQ5815/PRO19632Q6UWF5 114 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 MINDY2Q8NBR6 621 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
SF3B3-215ENST00000577085 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 SLC25A17O43808 307 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 SNRPBP14678 240 aaKnown RBP12.09□□□□□ -0.47
SF3B3-215ENST00000577085 CD36P16671 472 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 LINC00205P59089 165 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 GNB1P62873 340 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 DGCR2P98153 550 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 NDPQ00604 133 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 ZNF616Q08AN1 781 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
SF3B3-215ENST00000577085 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 HACD4Q5VWC8 232 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 ZNF491Q8N8L2 437 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 LGALS14Q8TCE9 139 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 HARBI1Q96MB7 349 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 VCX3AQ9NNX9 186 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 GAB2Q9UQC2 676 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
SF3B3-215ENST00000577085 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 K7EIL1 84 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 SHOXO15266 292 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 RAMP3O60896 148 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 PROP1O75360 226 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 CTXN2P0C2S0 81 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 RRASP10301 218 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 LGALS7P47929 136 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 LUMP51884 338 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-215ENST00000577085 FXYD3Q14802 87 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 KCTD21Q4G0X4 260 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 IDNKQ5T6J7 187 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 Q6ZS49 121 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 ARPC1AQ92747 370 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 FAM103A1Q9BTL3 118 aaKnown RBP12.08□□□□□ -0.48
SF3B3-215ENST00000577085 DCSTAMPQ9H295 470 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.48
SF3B3-215ENST00000577085 ZNF355PQ9NSJ1 428 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
SF3B3-215ENST00000577085 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-215ENST00000577085 TIMM50Q3ZCQ8 353 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 AKIRIN2Q53H80 203 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 H1FOOQ8IZA3 346 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-215ENST00000577085 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 CASTOR1Q8WTX7 329 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 RHBDL2Q9NX52 303 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-215ENST00000577085 NUBP2Q9Y5Y2 271 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 ETV7Q9Y603 341 aa12.07□□□□□ -0.48
SF3B3-215ENST00000577085 I3L521 148 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 J3QRK9 145 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 SCAND1P57086 179 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 TPPP2P59282 170 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 RUNX1Q01196 453 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 FHL3Q13643 280 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 ZNF260Q3ZCT1 412 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 BVESQ8NE79 360 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 DCUN1D5Q9BTE7 237 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 SLA2Q9H6Q3 261 aa12.06□□□□□ -0.48
SF3B3-215ENST00000577085 IGKV1D-8A0A087WSZ0 117 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 SOX15O60248 233 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-215ENST00000577085 ECI1P42126 302 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 ARPC4P59998 168 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 CD69Q07108 199 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 KIAA0141Q14154 515 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-215ENST00000577085 VMA21Q3ZAQ7 101 aa12.05□□□□□ -0.48
SF3B3-215ENST00000577085 CNIH2Q6PI25 160 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms