RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CD300EQ496F6 205 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-212ENST00000576613 DEFB125Q8N687 156 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 KCNG3Q8TAE7 436 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 DYNLRB2Q8TF09 96 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 PTX4Q96A99 478 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 PHB2Q99623 299 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 SRD5A3Q9H8P0 318 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 SLC35D1Q9NTN3 355 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 OR1A1Q9P1Q5 309 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 RBMY1BA6NDE4 496 aaKnown RBP8.8□□□□□ -1
CTDNEP1-212ENST00000576613 RBMY1EA6NEQ0 496 aaKnown RBP8.8□□□□□ -1
CTDNEP1-212ENST00000576613 OR11H12B2RN74 326 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 M0R1X1 148 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 PROP1O75360 226 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 CD7P09564 240 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 RBMY1DP0C7P1 496 aaKnown RBP8.8□□□□□ -1
CTDNEP1-212ENST00000576613 CELP19835 753 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 HTR2CP28335 458 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 GLT8D1Q68CQ7 371 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 OR10K2Q6IF99 312 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 C10orf67Q8IYJ2 551 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF485Q8NCK3 441 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 HARBI1Q96MB7 349 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 TM2D1Q9BX74 207 aa8.8□□□□□ -1
CTDNEP1-212ENST00000576613 FAM223BA6NKX1 122 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 TUSC2O75896 110 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 IGLV2-23P01705 113 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 CD1AP06126 327 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 OR9G9P0C7N8 305 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 LINC00205P59089 165 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 TAGLNQ01995 201 aaKnown RBP8.79□□□□□ -1
CTDNEP1-212ENST00000576613 GUCA2BQ16661 112 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 TTC23Q5W5X9 447 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 SLC16A13Q7RTY0 426 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 FAM223AQ8IWN6 122 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 NICN1Q9BSH3 213 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 C12orf4Q9NQ89 552 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 SMPD3Q9NY59 655 aaPredicted RBP8.79□□□□□ -1
CTDNEP1-212ENST00000576613 AK3Q9UIJ7 227 aa8.79□□□□□ -1
CTDNEP1-212ENST00000576613 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 CXorf65A6NEN9 183 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 NUPR2A6NF83 97 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 MSGN1A6NI15 193 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF785A8K8V0 405 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 BMPR1BO00238 502 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 MYL12BO14950 172 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 SHOXO15266 292 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 MPPED1O15442 326 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 CRYGBP07316 175 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 SCTP09683 121 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 APELAP0DMC3 54 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 RHOGP84095 191 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 ST3GAL4Q11206 333 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 UNC119Q13432 240 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 EXOSC2Q13868 293 aaKnown RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 RTL8BQ17RB0 113 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 DEFB114Q30KQ6 69 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 FAM209BQ5JX69 171 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 C1orf100Q5SVJ3 147 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 ADAD2Q8NCV1 583 aaKnown RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 DDB2Q92466 427 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 GGHQ92820 318 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 HDHD3Q9BSH5 251 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 URM1Q9BTM9 101 aaKnown RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 ST6GALNAC5Q9BVH7 336 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 WFDC10AQ9H1F0 79 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 RDH8Q9NYR8 311 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 TECRQ9NZ01 308 aaKnown RBP8.78□□□□□ -1
CTDNEP1-212ENST00000576613 FRAS1Q86XX4 4008 aa8.78□□□□□ -1
CTDNEP1-212ENST00000576613 EFCAB10A6NFE3 127 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 BPNT1O95861 308 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 SRMP19623 302 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 SERPINB10P48595 397 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 WNT4P56705 351 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 ATP5G2Q06055 141 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 RBM48Q5RL73 367 aaKnown RBP8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 SETD9Q8NE22 299 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 PHYHIPQ92561 330 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 Q9N2K0 584 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 ZC4H2Q9NQZ6 224 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 FAM53CQ9NYF3 392 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 ZNF230Q9UIE0 474 aaPredicted RBP8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 HSF4Q9ULV5 492 aa8.77□□□□□ -1.01
CTDNEP1-212ENST00000576613 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 A0A0A6YYD4 124 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 TMEM14DPA8MWL7 114 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 SOCS1O15524 211 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 CREBL2O60519 120 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 RRASP10301 218 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 FOLR2P14207 255 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 KIR2DS2P43631 304 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 PMS2P11Q13670 270 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 TNXAQ16473 311 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 VMA21Q3ZAQ7 101 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms