RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZFP57Q9NU63 452 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 COMMD3Q9UBI1 195 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 OR2W1Q9Y3N9 320 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 WSB1Q9Y6I7 421 aa12.01□□□□□ -0.49
SMG6-220ENST00000576218 IGHV7-81A0A0B4J1V7 117 aa12□□□□□ -0.49
SMG6-220ENST00000576218 TRAV41A0A0B4J266 112 aa12□□□□□ -0.49
SMG6-220ENST00000576218 SMIM31A0A1B0GVY4 71 aa12□□□□□ -0.49
SMG6-220ENST00000576218 MEIS3P1A6NDR6 274 aa12□□□□□ -0.49
SMG6-220ENST00000576218 SHOXO15266 292 aa12□□□□□ -0.49
SMG6-220ENST00000576218 XRCC3O43542 346 aa12□□□□□ -0.49
SMG6-220ENST00000576218 TUSC2O75896 110 aa12□□□□□ -0.49
SMG6-220ENST00000576218 SPDEFO95238 335 aa12□□□□□ -0.49
SMG6-220ENST00000576218 IGKV1-16P04430 117 aa12□□□□□ -0.49
SMG6-220ENST00000576218 IGF1P05019 195 aa12□□□□□ -0.49
SMG6-220ENST00000576218 ELANEP08246 267 aa12□□□□□ -0.49
SMG6-220ENST00000576218 SMIM18P0DKX4 95 aa12□□□□□ -0.49
SMG6-220ENST00000576218 RRASP10301 218 aa12□□□□□ -0.49
SMG6-220ENST00000576218 LINC00205P59089 165 aa12□□□□□ -0.49
SMG6-220ENST00000576218 GNB1P62873 340 aa12□□□□□ -0.49
SMG6-220ENST00000576218 TAGLNQ01995 201 aaKnown RBP12□□□□□ -0.49
SMG6-220ENST00000576218 FOXE3Q13461 319 aa12□□□□□ -0.49
SMG6-220ENST00000576218 GPR107Q5VW38 600 aa12□□□□□ -0.49
SMG6-220ENST00000576218 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
SMG6-220ENST00000576218 G3V4G9 280 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 SLC25A17O43808 307 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 SLC22A5O76082 557 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 CNIH1O95406 144 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 RPLP1P05386 114 aaKnown RBP11.99□□□□□ -0.49
SMG6-220ENST00000576218 PTHLHP12272 177 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 SLC6A1P30531 599 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 RORCP51449 518 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 RAB25P57735 213 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 TMEM267Q0VDI3 215 aaPredicted RBP11.99□□□□□ -0.49
SMG6-220ENST00000576218 PSG5Q15238 335 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 ZNF660Q6AZW8 331 aaPredicted RBP11.99□□□□□ -0.49
SMG6-220ENST00000576218 LCNL1Q6ZST4 164 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 C8orf86Q6ZUL3 223 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 HOGA1Q86XE5 327 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 ZNF695Q8IW36 515 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 GVQW1Q8N7I0 195 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 BVESQ8NE79 360 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 AP3S1Q92572 193 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 DCUN1D5Q9BTE7 237 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 GAB2Q9UQC2 676 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 MRPS7Q9Y2R9 242 aaKnown RBP11.99□□□□□ -0.49
SMG6-220ENST00000576218 PRELID3BQ9Y3B1 194 aa11.99□□□□□ -0.49
SMG6-220ENST00000576218 FAM25AB3EWG3 89 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 FAM25CB3EWG5 89 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 FAM25GB3EWG6 89 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 G3V318 75 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 NOL3O60936 208 aaKnown RBP11.98□□□□□ -0.49
SMG6-220ENST00000576218 PROP1O75360 226 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 CA2P00918 260 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 CD40LGP29965 261 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 TAS2R20P59543 309 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 VMA21Q3ZAQ7 101 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 MZT2AQ6P582 158 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 KCTD9Q7L273 389 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 ANKRD13BQ86YJ7 626 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 GRPEL2Q8TAA5 225 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 ACOT12Q8WYK0 555 aa11.98□□□□□ -0.49
SMG6-220ENST00000576218 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 A0A1W2PN81 502 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 GABARAPO95166 117 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 CRYZL1O95825 349 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 IGHG4P01861 327 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 FCGR2CP31995 323 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 CHRNA7P36544 502 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 LGALS7P47929 136 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 CX3CL1P78423 397 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 C18orf65Q6ZTR6 163 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 SECTM1Q8WVN6 248 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 ARPC1AQ92747 370 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
SMG6-220ENST00000576218 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
SMG6-220ENST00000576218 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 FCGR3BO75015 233 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 HLA-DQB1P01920 261 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 EIF4EP06730 217 aaKnown RBP11.96□□□□□ -0.49
SMG6-220ENST00000576218 DUTP33316 252 aaKnown RBP11.96□□□□□ -0.49
SMG6-220ENST00000576218 PRSS3P35030 304 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 FXYD4P59646 89 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 HERV-K104P61576 105 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 CDK10Q15131 360 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 OXLD1Q5BKU9 147 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 PPP1R27Q86WC6 154 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 C5orf30Q96GV9 206 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 FAM103A1Q9BTL3 118 aaKnown RBP11.96□□□□□ -0.49
SMG6-220ENST00000576218 EHFQ9NZC4 300 aa11.96□□□□□ -0.49
SMG6-220ENST00000576218 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
SMG6-220ENST00000576218 RBMX2Q9Y388 322 aaKnown RBP11.96□□□□□ -0.49
SMG6-220ENST00000576218 IGKV1D-13A0A0B4J2D9 117 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 FCN1O00602 326 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 APOA1P02647 267 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 IGKV1-13P0DP09 117 aa11.95□□□□□ -0.5
SMG6-220ENST00000576218 IGLL1P15814 213 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms