RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 TSSC4Q9Y5U2 329 aaPredicted RBP10.72□□□□□ -0.69
CIITA-210ENST00000575513 TCRBV4S1A1TA0A5B7 111 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 H7C2Y5 167 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 RGS5O15539 181 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 TSPAN15O95858 294 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 APOA2P02652 100 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 NAT1P18440 290 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 LIN54Q6MZP7 749 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 PDPNQ86YL7 162 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 LAX1Q8IWV1 398 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 GVQW1Q8N7I0 195 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 ZNF383Q8NA42 475 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 OR4F17Q8NGA8 305 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 MCFD2Q8NI22 146 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 ADTRPQ96IZ2 230 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 OR4F4Q96R69 305 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 ZFP57Q9NU63 452 aa10.71□□□□□ -0.69
CIITA-210ENST00000575513 ZNF107Q9UII5 783 aaPredicted RBP10.71□□□□□ -0.69
CIITA-210ENST00000575513 MRPS7Q9Y2R9 242 aaKnown RBP10.71□□□□□ -0.69
CIITA-210ENST00000575513 RBM7Q9Y580 266 aaKnown RBP10.71□□□□□ -0.69
CIITA-210ENST00000575513 LINC01548A6NM66 108 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 M0R1X1 148 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 RRHO14718 337 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 TUSC2O75896 110 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 SPDEFO95238 335 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 OR5H8P0DN80 308 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 RRASP10301 218 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 SLC6A1P30531 599 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 LGALS7P47929 136 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 THBS3P49746 956 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 LUMP51884 338 aaPredicted RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 TEX38Q6PEX7 206 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 GLDNQ6ZMI3 551 aaPredicted RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 SNX29P2Q8IUI4 249 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 DRAXINQ8NBI3 349 aaPredicted RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 SNAPC3Q92966 411 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 FLYWCH2Q96CP2 140 aaKnown RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 NOL4LQ96MY1 436 aaPredicted RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 TSNAXQ99598 290 aaKnown RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 DCUN1D5Q9BTE7 237 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 C6orf62Q9GZU0 229 aaPredicted RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 IFT46Q9NQC8 304 aa10.7□□□□□ -0.7
CIITA-210ENST00000575513 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
CIITA-210ENST00000575513 CNTFRP26992 372 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 ARPC4P59998 168 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 MRPS10P82664 201 aaKnown RBP10.69□□□□□ -0.7
CIITA-210ENST00000575513 MSMO1Q15800 293 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 FOXB2Q5VYV0 432 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 ZNF660Q6AZW8 331 aaPredicted RBP10.69□□□□□ -0.7
CIITA-210ENST00000575513 ZNF329Q86UD4 541 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 ZNF645Q8N7E2 425 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 FAM110DQ8TAY7 271 aaPredicted RBP10.69□□□□□ -0.7
CIITA-210ENST00000575513 DIRAS2Q96HU8 199 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 SOSTQ9BQB4 213 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 OR51J1Q9H342 316 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 NECAP2Q9NVZ3 263 aa10.69□□□□□ -0.7
CIITA-210ENST00000575513 IGKV1-16P04430 117 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 ELANEP08246 267 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 VDAC1P21796 283 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 NFYAP23511 347 aaPredicted RBP10.68□□□□□ -0.7
CIITA-210ENST00000575513 TNFSF8P32971 234 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
CIITA-210ENST00000575513 TAS2R46P59540 309 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 RPS16P62249 146 aaKnown RBP10.68□□□□□ -0.7
CIITA-210ENST00000575513 CFHR3Q02985 330 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 CBX3Q13185 183 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 FOXE3Q13461 319 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 PSG5Q15238 335 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 RTL8BQ17RB0 113 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 C10orf99Q6UWK7 81 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 OR5AP2Q8NGF4 316 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 GIMAP1Q8WWP7 306 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 DDB2Q92466 427 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 R3HDM4Q96D70 268 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 RBMXL1Q96E39 390 aaKnown RBP10.68□□□□□ -0.7
CIITA-210ENST00000575513 ABHD1Q96SE0 405 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 SLC35D1Q9NTN3 355 aa10.68□□□□□ -0.7
CIITA-210ENST00000575513 IGHV7-81A0A0B4J1V7 117 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 MEIS3P1A6NDR6 274 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 A6NHS1 94 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 CTDSPLO15194 276 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 IGHG4P01861 327 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 RCVRNP35243 200 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
CIITA-210ENST00000575513 LINC00205P59089 165 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 CDK10Q15131 360 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 TMEM177Q53S58 311 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 HIST2H2BDQ6DRA6 164 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 PYHIN1Q6K0P9 492 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 DHRS11Q6UWP2 260 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 ZNF562Q6V9R5 426 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 LYSMD2Q8IV50 215 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 C5orf30Q96GV9 206 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 LINC00527Q9UJ94 153 aa10.67□□□□□ -0.7
CIITA-210ENST00000575513 GABARAPH6UMI1 98 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms