RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 RBKSQ9H477 322 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 NCOR1P1Q9H4R4 102 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 NGBQ9NPG2 151 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 MARCH11A6NNE9 402 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 PROP1O75360 226 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 F12P00748 615 aaPredicted RBP11.64□□□□□ -0.55
VPS33B-208ENST00000574755 ZNF273Q14593 569 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 LILRB2Q8N423 598 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 EIF5A2Q9GZV4 153 aaKnown RBP11.64□□□□□ -0.55
VPS33B-208ENST00000574755 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 ROS1P08922 2347 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 KBTBD11-OT1A0A1B0GTJ5 212 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 C9JQL5 133 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 M0R1X1 148 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 RAB29O14966 203 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 FCGR3BO75015 233 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 TLE1Q04724 770 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 GUK1Q16774 197 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 RPL39P5Q59GN2 51 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 LEAP2Q969E1 77 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 ABHD14AQ9BUJ0 271 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 SAP30LQ9HAJ7 183 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 VSTM5A8MXK1 200 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 CD55P08174 381 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 CGB3P0DN86 165 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 CGB7P0DN87 165 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 CASP6P55212 293 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 ARL16Q0P5N6 197 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 AKR1C8PQ5T2L2 129 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 TEX36Q5VZQ5 186 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 C17orf50Q8WW18 174 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 FBXO7Q9Y3I1 522 aa11.63□□□□□ -0.55
VPS33B-208ENST00000574755 FAM74A7A6NL05 159 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-208ENST00000574755 GPR37O15354 613 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 SNAPINO95295 136 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 PPT1P50897 306 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
VPS33B-208ENST00000574755 PEA15Q15121 130 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 FAM74A3Q4VXF1 159 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 HAPLN4Q86UW8 402 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 SCGB1C1Q8TD33 95 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 R3HDM4Q96D70 268 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 DOCK11Q5JSL3 2073 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 FAM157AC9JC47 383 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 SLC31A2O15432 143 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 NFYBP25208 207 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 RAB7AP51149 207 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 UTF1Q5T230 341 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 ZNF525Q8N782 197 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 LFNGQ8NES3 379 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 PBDC1Q9BVG4 233 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 EGLN1Q9GZT9 426 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 GFOD1Q9NXC2 390 aa11.62□□□□□ -0.55
VPS33B-208ENST00000574755 A0A1W2PPE3 182 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 NKX6-3A6NJ46 265 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 HPRT1P00492 218 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 TCF23Q7RTU1 214 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 DTD1Q8TEA8 209 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 RSG1Q9BU20 258 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 HCFC1P51610 2035 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 YLPM1P49750 1951 aaKnown RBP11.61□□□□□ -0.55
VPS33B-208ENST00000574755 TRAV38-1A0A0B4J264 116 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 ZG16O60844 167 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 H2AFB1P0C5Y9 115 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 NDUFB7P17568 137 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 S1PR3Q99500 378 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 PRELID3BQ9Y3B1 194 aa11.61□□□□□ -0.55
VPS33B-208ENST00000574755 SPTA1P02549 2419 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 POLEQ07864 2286 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 ZNF729A6NN14 1252 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-208ENST00000574755 SHISA9B4DS77 424 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 C1orf87Q8N0U7 546 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 CCL17Q92583 94 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 ZZEF1O43149 2961 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 ITGB1BP1O14713 200 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 ATF4P18848 351 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-208ENST00000574755 NPBWR1P48145 328 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 TLE4Q04727 773 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 NCMAPQ5T1S8 102 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 TMEM88Q6PEY1 159 aa11.6□□□□□ -0.55
VPS33B-208ENST00000574755 NEUROG1Q92886 237 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms