RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SPDEFO95238 335 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 IGHV3-11P01762 117 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 IGKV1-16P04430 117 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 OR8U9P0C7N5 309 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 HIST1H1DP16402 221 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 CRIP2P52943 208 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 TPPP2P59282 170 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 RUNX1Q01196 453 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 IGSF11Q5DX21 431 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF383Q8NA42 475 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 MINDY2Q8NBR6 621 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 LFNGQ8NES3 379 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ARPC1AQ92747 370 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 PTX4Q96A99 478 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 FLYWCH2Q96CP2 140 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 HARBI1Q96MB7 349 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 MS4A10Q96PG2 267 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 RNF5Q99942 180 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 CABLES2Q9BTV7 478 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ALX4Q9H161 411 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ATG5Q9H1Y0 275 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 Q9H521 79 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF355PQ9NSJ1 428 aa7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF230Q9UIE0 474 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF256Q9Y2P7 627 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-212ENST00000573328 LINC01619G3V211 115 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 MFNGO00587 321 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 SOX15O60248 233 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 SAP30O75446 220 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 CNIH1O95406 144 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 ATP6V1G2O95670 118 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 GSTT2P0CG29 244 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 GSTT2BP0CG30 244 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 RAB6AP20340 208 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 SLURP1P55000 103 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 LINC00205P59089 165 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 RTL8BQ17RB0 113 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 CD200R1LQ6Q8B3 271 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 DCUN1D4Q92564 292 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 TPSG1Q9NRR2 321 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 KCNK7Q9Y2U2 307 aa7.49□□□□□ -1.21
NPLOC4-212ENST00000573328 IGHV4OR15-8A0A075B7B6 117 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 A0A087WW49 117 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 TRBV6-7A0A0A0MS04 114 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 J3QRK9 145 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 RAB27BO00194 218 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 SHOXO15266 292 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 MRPS14O60783 128 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 PROP1O75360 226 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 TRGV3P03979 118 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 GALP22466 123 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 INSL3P51460 131 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 PITPNAQ00169 270 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 KIAA0141Q14154 515 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 FXYD3Q14802 87 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 ARL6IP1Q15041 203 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 AKIRIN2Q53H80 203 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 ASPHD1Q5U4P2 390 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 UBE2UQ5VVX9 321 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF562Q6V9R5 426 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 BVESQ8NE79 360 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 FCGR1BQ92637 280 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 PHB2Q99623 299 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 CENPOQ9BU64 300 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 TOLLIPQ9H0E2 274 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 SLA2Q9H6Q3 261 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 TXNL4BQ9NX01 149 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 SDHAF2Q9NX18 166 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 SCOCQ9UIL1 159 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 STUB1Q9UNE7 303 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 SSR3Q9UNL2 185 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 NUBP2Q9Y5Y2 271 aa7.48□□□□□ -1.21
NPLOC4-212ENST00000573328 C13orf42A0A1B0GVH6 325 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 DIRAS3O95661 229 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 RRASP10301 218 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 EGR2P11161 476 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 LGALS7P47929 136 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 GNG2P59768 71 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 TAGLNQ01995 201 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 VMA21Q3ZAQ7 101 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 SPARTQ8N0X7 666 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 POC5Q8NA72 575 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 OR5T1Q8NG75 326 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 DAPK2Q9UIK4 370 aa7.47□□□□□ -1.21
NPLOC4-212ENST00000573328 TNCP24821 2201 aa7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 TMEM235A6NFC5 223 aa7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 ARPC1BO15143 372 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 MPPED1O15442 326 aa7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 SCGNO76038 276 aa7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 CRYZL1O95825 349 aa7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-212ENST00000573328 APELAP0DMC3 54 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 213.1 ms