RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CLLU1Q5K131 121 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
SMG6-213ENST00000573166 ZNF525Q8N782 197 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 ACY3Q96HD9 319 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 PLEKHA2Q9HB19 425 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 AUP1Q9Y679 476 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 E9PQ18 207 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 OR2B8PP59922 312 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 PRB3Q04118 309 aaPredicted RBP8.47□□□□□ -1.05
SMG6-213ENST00000573166 OR2F1Q13607 317 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 Q6ZRG5 221 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 LYZL2Q7Z4W2 148 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 THNSL2Q86YJ6 484 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 ZFP82Q8N141 532 aa8.47□□□□□ -1.05
SMG6-213ENST00000573166 EGR1P18146 543 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 PPOXP50336 477 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 RPL11P62913 178 aaKnown RBP8.46□□□□□ -1.05
SMG6-213ENST00000573166 ZNF645Q8N7E2 425 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 TMEM68Q96MH6 324 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 KCNIP2Q9NS61 270 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 ZNF146Q15072 292 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 ZNF66Q6ZN08 573 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 Q6ZR03 302 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 NTNG2Q96CW9 530 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 MISP3Q96FF7 219 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 BPESC1Q9GZL8 116 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 GPR132Q9UNW8 380 aa8.46□□□□□ -1.05
SMG6-213ENST00000573166 SZT2Q5T011 3432 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 PSPNO60542 156 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 APELAP0DMC3 54 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 RAB32Q13637 225 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 NCR3LG1Q68D85 454 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 ACOT7LQ6ZUV0 252 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 FAM89BQ8N5H3 189 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 MRPL30Q8TCC3 161 aaKnown RBP8.46□□□□□ -1.06
SMG6-213ENST00000573166 TMEM186Q96B77 213 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 SSX3Q99909 188 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 DPM3Q9P2X0 92 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 A0A1W2PN81 502 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 CHRNA7P36544 502 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 TMEM267Q0VDI3 215 aaPredicted RBP8.46□□□□□ -1.06
SMG6-213ENST00000573166 LY6EQ16553 131 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 C2orf68Q2NKX9 166 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 OR5T1Q8NG75 326 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 C2CD4CQ8TF44 421 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 TMEM230Q96A57 120 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 THYN1Q9P016 225 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 WASHC3Q9Y3C0 194 aa8.46□□□□□ -1.06
SMG6-213ENST00000573166 USF1P22415 310 aaPredicted RBP8.45□□□□□ -1.06
SMG6-213ENST00000573166 OPRK1P41145 380 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 POLR2GP62487 172 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMG6-213ENST00000573166 FAM213BQ8TBF2 198 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 RAB40CQ96S21 281 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 SOSTQ9BQB4 213 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 SEBOXQ9HB31 216 aaPredicted RBP8.45□□□□□ -1.06
SMG6-213ENST00000573166 HES4Q9HCC6 221 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 SMCO4Q9NRQ5 59 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 LOC105371267A0A1B0GV96 52 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 HPRT1P00492 218 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 LGALS7P47929 136 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 ELLP55199 621 aaPredicted RBP8.45□□□□□ -1.06
SMG6-213ENST00000573166 PRNDQ9UKY0 176 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 PUS1Q9Y606 427 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMG6-213ENST00000573166 OR5G3P0C626 314 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 VSIG10L2P0DP72 767 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 TMEM11P17152 192 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 WDR25Q64LD2 544 aaPredicted RBP8.45□□□□□ -1.06
SMG6-213ENST00000573166 STPG2Q8N412 459 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 DRAM1Q8N682 238 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 CORO2AQ92828 525 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 SLC39A9Q9NUM3 307 aa8.45□□□□□ -1.06
SMG6-213ENST00000573166 YLPM1P49750 1951 aaKnown RBP8.45□□□□□ -1.06
SMG6-213ENST00000573166 NUP210LQ5VU65 1888 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 HIVEP2P31629 2446 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 IGLV3-9A0A075B6K5 115 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 LINC00862A6NCI5 91 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 NUDT19A8MXV4 375 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 PGLYRP1O75594 196 aaPredicted RBP8.44□□□□□ -1.06
SMG6-213ENST00000573166 CT45A6P0DMU7 189 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 CT45A5P0DMU8 189 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 CT45A7P0DMV0 189 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 MPZP25189 248 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 DEFA6Q01524 100 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 CT45A1Q5HYN5 189 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 ETV3LQ6ZN32 361 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 CT45A3Q8NHU0 189 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 HS3ST6Q96QI5 342 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 SLC25A32Q9H2D1 315 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 METRNQ9UJH8 293 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 VCANP13611 3396 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 A0A0A6YYD4 124 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 SYNGR2O43760 224 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 SLC25A17O43808 307 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 UBE2KP61086 200 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 ECSCRQ19T08 205 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 RPL39P5Q59GN2 51 aa8.44□□□□□ -1.06
SMG6-213ENST00000573166 ZNF497Q6ZNH5 498 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms