RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 BAGE2Q86Y30 109 aa13□□□□□ -0.33
SMG6-207ENST00000570756 RAB1CQ92928 201 aa13□□□□□ -0.33
SMG6-207ENST00000570756 SLC35E1Q96K37 410 aa13□□□□□ -0.33
SMG6-207ENST00000570756 TP53TG3Q9ULZ0 132 aa13□□□□□ -0.33
SMG6-207ENST00000570756 DOCK11Q5JSL3 2073 aa13□□□□□ -0.33
SMG6-207ENST00000570756 ASCC3Q8N3C0 2202 aaKnown RBP13□□□□□ -0.33
SMG6-207ENST00000570756 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
SMG6-207ENST00000570756 G3V3Y1 287 aa13□□□□□ -0.33
SMG6-207ENST00000570756 TCF21O43680 179 aa13□□□□□ -0.33
SMG6-207ENST00000570756 CDKN1AP38936 164 aa13□□□□□ -0.33
SMG6-207ENST00000570756 PLA2G5P39877 138 aa13□□□□□ -0.33
SMG6-207ENST00000570756 LHX2P50458 406 aa13□□□□□ -0.33
SMG6-207ENST00000570756 C11orf42Q8N5U0 333 aa13□□□□□ -0.33
SMG6-207ENST00000570756 OR10G8Q8NGN5 311 aa13□□□□□ -0.33
SMG6-207ENST00000570756 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
SMG6-207ENST00000570756 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
SMG6-207ENST00000570756 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
SMG6-207ENST00000570756 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
SMG6-207ENST00000570756 PMS2P5A8MQ11 134 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 EGR1P18146 543 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 CCNOP22674 350 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 CHRNB4P30926 498 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 ATP5G3P48201 142 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 UBE2G2P60604 165 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 ZNF90Q03938 601 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 NRN1LQ496H8 165 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 FBXW9Q5XUX1 488 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 FAM58AQ8N1B3 248 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 KCNE4Q8WWG9 221 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 MRPL18Q9H0U6 180 aaKnown RBP12.99□□□□□ -0.33
SMG6-207ENST00000570756 PROK2Q9HC23 129 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 CLN8Q9UBY8 286 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 LRRC30A6NM36 301 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■■■■□ 23.3
SMG6-207ENST00000570756 TIMP3P35625 211 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 DRAM1Q8N682 238 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 OR1L1Q8NH94 360 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 RNF2Q99496 336 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 ZNF586Q9NXT0 402 aa12.99□□□□□ -0.33
SMG6-207ENST00000570756 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 A0A1W2PPV4 95 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 CBLN1P23435 193 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 SSR4P51571 173 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 LINC00310P59036 64 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 Q0VG73 95 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 SIGLECL1Q8N7X8 197 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
SMG6-207ENST00000570756 CCL7P80098 99 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 PCOLCEQ15113 449 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 ZNF114Q8NC26 417 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 APOBEC3DQ96AK3 386 aaPredicted RBP12.98□□□□□ -0.33
SMG6-207ENST00000570756 CCDC74BQ96LY2 380 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 TRAPPC2LQ9UL33 140 aa12.98□□□□□ -0.33
SMG6-207ENST00000570756 C20orf202A1L168 122 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 PGPEP1LA6NFU8 196 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 TFPI2P48307 235 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 SUMO1P63165 101 aaKnown RBP12.97□□□□□ -0.33
SMG6-207ENST00000570756 CADM4Q8NFZ8 388 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 ZNF488Q96MN9 340 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 IL36BQ9NZH7 164 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 SLC45A2Q9UMX9 530 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 CXCL13O43927 109 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 MMP23AO75900 390 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 CELA2AP08217 269 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 ZBTB34Q8NCN2 500 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
SMG6-207ENST00000570756 ZNF552Q9H707 407 aaPredicted RBP12.97□□□□□ -0.33
SMG6-207ENST00000570756 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
SMG6-207ENST00000570756 ODAMA1E959 279 aa12.96□□□□□ -0.33
SMG6-207ENST00000570756 C5orf49A4QMS7 147 aa12.96□□□□□ -0.33
SMG6-207ENST00000570756 OR5B21A6NL26 309 aa12.96□□□□□ -0.33
SMG6-207ENST00000570756 DEFA4P12838 97 aa12.96□□□□□ -0.33
SMG6-207ENST00000570756 G6PCP35575 357 aa12.96□□□□□ -0.33
SMG6-207ENST00000570756 COMPP49747 757 aaPredicted RBP12.96□□□□□ -0.33
SMG6-207ENST00000570756 SLC25A45Q8N413 288 aa12.96□□□□□ -0.33
SMG6-207ENST00000570756 FCN1O00602 326 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 ZG16O60844 167 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 P0C879 139 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 SRD5A2P31213 254 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 GNG10P50151 68 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 B3GALT5-AS1P59052 145 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 GNG3P63215 75 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.34
SMG6-207ENST00000570756 GGNQ86UU5 652 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 SH2D2AQ9NP31 389 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 FOXJ2Q9P0K8 574 aa12.96□□□□□ -0.34
SMG6-207ENST00000570756 TRBV20OR9-2A0A075B6H5 130 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 LOC102723996A0A087X1L8 192 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 ANKRD30BLA7E2S9 258 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 A8MXE2 369 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 DIRC3C9JPN6 131 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 BMP5P22003 454 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 MLF1P58340 268 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 KRTDAPP60985 99 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 YRDCQ86U90 279 aaKnown RBP12.95□□□□□ -0.34
SMG6-207ENST00000570756 C1orf174Q8IYL3 243 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms