RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TMED4Q7Z7H5 227 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 LINC01555Q8NAE3 123 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR1P1Q8NH06 330 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR51F2Q8NH61 342 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR51E1Q8TCB6 317 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 PTH2Q96A98 100 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 ROPN1LQ96C74 230 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 RNF157Q96PX1 679 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 S100A13Q99584 98 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 MIEN1Q9BRT3 115 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 RSG1Q9BU20 258 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 TAPBPLQ9BX59 468 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 PLA2G2FQ9BZM2 168 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 CACFD1Q9UGQ2 172 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 NXT1Q9UKK6 140 aaKnown RBP3.79□□□□□ -1.8
UBR1-208ENST00000569066 FARSAQ9Y285 508 aaKnown RBP3.79□□□□□ -1.8
UBR1-208ENST00000569066 SCN4AP35499 1836 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 SLIT3O75094 1523 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 NEURL4Q96JN8 1562 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 FLT4P35916 1363 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.78□□□□□ -1.8
UBR1-208ENST00000569066 TGIF2-C20orf24A0A0A6YYL0 155 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 C7orf77A4D0Y5 90 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 PLPP1O14494 284 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 MAGEB4O15481 346 aaPredicted RBP3.78□□□□□ -1.8
UBR1-208ENST00000569066 RBFOX2O43251 390 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBR1-208ENST00000569066 MAGEA12P43365 314 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 BAXQ07812 192 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 SRSF6Q13247 344 aaKnown RBP3.78□□□□□ -1.8
UBR1-208ENST00000569066 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 RPEL1Q2QD12 228 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 SPATA31B1PQ5VZV4 182 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 LCN8Q6JVE9 175 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 DNM1P34Q6PK57 102 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 OR2W3Q7Z3T1 314 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 DEFB128Q7Z7B8 93 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 ZNF567Q8N184 647 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 GPR26Q8NDV2 337 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 ZNF555Q8NEP9 628 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 OR4K5Q8NGD3 323 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 RNF138Q8WVD3 245 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 ZNF799Q96GE5 643 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 TIMM29Q9BSF4 260 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 NOX3Q9HBY0 568 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 CA10Q9NS85 328 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 ZNF391Q9UJN7 358 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 ZNF337Q9Y3M9 751 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 SNX10Q9Y5X0 201 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 KDM3BQ7LBC6 1761 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 PLXND1Q9Y4D7 1925 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 KIAA1551Q9HCM1 1747 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 TRBV6-6A0A0A6YYG2 114 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 HMSDA8MTL9 139 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 SNAPC5O75971 98 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 TNFSF15O95150 251 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 CD14P08571 375 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 ZNF658BQ4V348 819 aaPredicted RBP3.78□□□□□ -1.8
UBR1-208ENST00000569066 GCSAMLQ5JQS6 135 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 OR2T2Q6IF00 324 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 CEMP1Q6PRD7 247 aaPredicted RBP3.78□□□□□ -1.8
UBR1-208ENST00000569066 TSTD1Q8NFU3 115 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 OR2T27Q8NH04 317 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 FOXC2Q99958 501 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 OR8D2Q9GZM6 311 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 LPAR5Q9H1C0 372 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 CASKIN1Q8WXD9 1431 aa3.78□□□□□ -1.8
UBR1-208ENST00000569066 NWD1Q149M9 1564 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CEP170BQ9Y4F5 1589 aaPredicted RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 TMEM235A6NFC5 223 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 C9JQL5 133 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 NME4O00746 187 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 STK16O75716 305 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 SC5DO75845 299 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 SFTA3P0C7M3 94 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CT45A6P0DMU7 189 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CT45A5P0DMU8 189 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CT45A7P0DMV0 189 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 PSG2P11465 335 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 ZNF133P52736 654 aaPredicted RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 FOXA1P55317 472 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 RAB8AP61006 207 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CDK5Q00535 292 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 FABP5Q01469 135 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 RGNQ15493 299 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CT45A1Q5HYN5 189 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CST9Q5W186 159 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CLEC20AQ6ZU45 233 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 MRPL55Q7Z7F7 128 aaKnown RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 SLC26A10Q8NG04 563 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR52E2Q8NGJ4 325 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 OR9I1Q8NGQ6 314 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 CT45A3Q8NHU0 189 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 ZNF675Q8TD23 568 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 TNFAIP8L1Q8WVP5 186 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 GPR22Q99680 433 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 SIGMAR1Q99720 223 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 SULT4A1Q9BR01 284 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 ARL5AQ9Y689 179 aa3.77□□□□□ -1.81
UBR1-208ENST00000569066 ZCCHC11Q5TAX3 1644 aaKnown RBP3.77□□□□□ -1.81
UBR1-208ENST00000569066 ZFC3H1O60293 1989 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms