RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 FAM209BQ5JX69 171 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 SFXN4Q6P4A7 337 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 CNIH2Q6PI25 160 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 PPP1R27Q86WC6 154 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 TEX45Q8NA69 505 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 OSR1Q8TAX0 266 aaPredicted RBP8.73□□□□□ -1.01
CDH3-206ENST00000567674 AIFM2Q9BRQ8 373 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 HDHD3Q9BSH5 251 aaPredicted RBP8.73□□□□□ -1.01
CDH3-206ENST00000567674 ATG5Q9H1Y0 275 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 OR1A1Q9P1Q5 309 aa8.73□□□□□ -1.01
CDH3-206ENST00000567674 A0A0G2JLM5 398 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 GSTT2P0CG29 244 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 SLC2A2P11168 524 aaPredicted RBP8.72□□□□□ -1.01
CDH3-206ENST00000567674 OR10A3P58181 314 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 RPS16P62249 146 aaKnown RBP8.72□□□□□ -1.01
CDH3-206ENST00000567674 DGCR2P98153 550 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 ZNF616Q08AN1 781 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 ZNF260Q3ZCT1 412 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 CDNFQ49AH0 187 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 NR2C2APQ86WQ0 139 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 H1FOOQ8IZA3 346 aaPredicted RBP8.72□□□□□ -1.01
CDH3-206ENST00000567674 ZNF383Q8NA42 475 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 RITA1Q96K30 269 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 GINS4Q9BRT9 223 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 VCX3AQ9NNX9 186 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 SLC35D1Q9NTN3 355 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 SDHAF2Q9NX18 166 aa8.72□□□□□ -1.01
CDH3-206ENST00000567674 METTL1Q9UBP6 276 aaKnown RBP8.72□□□□□ -1.01
CDH3-206ENST00000567674 BET1O15155 118 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 HLA-DQB1P01920 261 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 IGKV1-16P04430 117 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 FGF2P09038 288 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 CBX5P45973 191 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 IGSF11Q5DX21 431 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 ZNF429Q86V71 674 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 ZNF645Q8N7E2 425 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 ZBTB34Q8NCN2 500 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 OR11H1Q8NG94 326 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 OR1N2Q8NGR9 330 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 BORCS5Q969J3 196 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 FBXL15Q9H469 300 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 PARP11Q9NR21 331 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 DIABLOQ9NR28 239 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 SPATA2Q9UM82 520 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 PRELID3BQ9Y3B1 194 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 OR2W1Q9Y3N9 320 aa8.71□□□□□ -1.02
CDH3-206ENST00000567674 RBM7Q9Y580 266 aaKnown RBP8.71□□□□□ -1.02
CDH3-206ENST00000567674 A0A087WXM4 84 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 M0R1X1 148 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 TNFAIP8O95379 198 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 HSPB1P04792 205 aaKnown RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 CRYGBP07316 175 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 OR8U9P0C7N5 309 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 CD36P16671 472 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 AADACP22760 399 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 CNTFRP26992 372 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 DUTP33316 252 aaKnown RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 SDC2P34741 201 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 UBE2KP61086 200 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 VMA21Q3ZAQ7 101 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 ACTBL2Q562R1 376 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 OVCH2Q7RTZ1 564 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 VSTM2AQ8TAG5 236 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 DDB2Q92466 427 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 ARPC1AQ92747 370 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 USMG5Q96IX5 58 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 RHOVQ96L33 236 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 CMTM3Q96MX0 182 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 HSD17B10Q99714 261 aaKnown RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 PARP12Q9H0J9 701 aaKnown RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 OR2D2Q9H210 308 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 RHBDL2Q9NX52 303 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 DAPK2Q9UIK4 370 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 MRPS7Q9Y2R9 242 aaKnown RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 RRP15Q9Y3B9 282 aaKnown RBP8.7□□□□□ -1.02
CDH3-206ENST00000567674 WSB1Q9Y6I7 421 aa8.7□□□□□ -1.02
CDH3-206ENST00000567674 LINC01619G3V211 115 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 G3V318 75 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 LGALS1P09382 135 aaKnown RBP8.69□□□□□ -1.02
CDH3-206ENST00000567674 GNG2P59768 71 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 ARPC4P59998 168 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 KRTAP10-11P60412 298 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 PLA2G7Q13093 441 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 FXYD3Q14802 87 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 ZNF66Q6ZN08 573 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 C5orf24Q7Z6I8 188 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 CADM3Q8N126 398 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 KCTD12Q96CX2 325 aaKnown RBP8.69□□□□□ -1.02
CDH3-206ENST00000567674 B9D2Q9BPU9 175 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 KLK15Q9H2R5 256 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 ANXA10Q9UJ72 324 aa8.69□□□□□ -1.02
CDH3-206ENST00000567674 A0A1W2PN81 502 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 K7EIL1 84 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 FCN1O00602 326 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 SHOXO15266 292 aa8.68□□□□□ -1.02
CDH3-206ENST00000567674 TUSC2O75896 110 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms