RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 AIFM2Q9BRQ8 373 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 PCGF1Q9BSM1 259 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 C5orf66Q9H5L9 145 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 TAF9BQ9HBM6 251 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 IDI2-AS1Q9NZ38 188 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 MBD2Q9UBB5 411 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 C14orf166Q9Y224 244 aaKnown RBP10.3□□□□□ -0.76
SF3B3-206ENST00000565990 ANK3Q12955 4377 aaKnown RBP10.29□□□□□ -0.76
SF3B3-206ENST00000565990 RNASEK-C17orf49H0YIS7 233 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 SPINT2O43291 252 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 DIRAS3O95661 229 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 PMP2P02689 132 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 GAPDHP04406 335 aaKnown RBP10.29□□□□□ -0.76
SF3B3-206ENST00000565990 AKR1C4P17516 323 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 CTRB1P17538 263 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 SSTR5P35346 364 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 GLP1RP43220 463 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 UBE2E1P51965 193 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 IL15RAQ13261 267 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 NCR3LG1Q68D85 454 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 CTRB2Q6GPI1 263 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 C5orf24Q7Z6I8 188 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 OR11H6Q8NGC7 330 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 NANPQ8TBE9 248 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 PCNPQ8WW12 178 aaKnown RBP10.29□□□□□ -0.76
SF3B3-206ENST00000565990 TMEM230Q96A57 120 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 TOLLIPQ9H0E2 274 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 TMEM133Q9H2Q1 129 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 RAB9BQ9NP90 201 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 ZC4H2Q9NQZ6 224 aa10.29□□□□□ -0.76
SF3B3-206ENST00000565990 ZNF230Q9UIE0 474 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-206ENST00000565990 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-206ENST00000565990 IGKV1D-8A0A087WSZ0 117 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 PIGBOS1A0A0B4J2F0 54 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 HBZP02008 142 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 SCTP09683 121 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 OMGP23515 440 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 KIR2DS4P43632 304 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 DLX1P56177 255 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 KIR2DS1Q14954 304 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 Q3ZCU0 254 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 UTF1Q5T230 341 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 C9orf139Q6ZV77 190 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 C8orf31Q8N9H6 132 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 ADAD2Q8NCV1 583 aaKnown RBP10.28□□□□□ -0.76
SF3B3-206ENST00000565990 OR1L1Q8NH94 360 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 RTBDNQ9BSG5 229 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-206ENST00000565990 ST6GALNAC5Q9BVH7 336 aa10.28□□□□□ -0.76
SF3B3-206ENST00000565990 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
SF3B3-206ENST00000565990 IGHV1-69DA0A0B4J2H0 117 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 IGKV1-6A0A0C4DH72 117 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 CCSO14618 274 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 SCO1O75880 301 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 IGLV1-47P01700 117 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 IGHV1-69P01742 117 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 H2AFB1P0C5Y9 115 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-206ENST00000565990 UCP3P55916 312 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 HLA-DRB3P79483 266 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 CHRFAM7AQ494W8 412 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 MORN2Q502X0 79 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 PRAMEF5Q5TYX0 476 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 AADACL3Q5VUY0 350 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 KCTD9Q7L273 389 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 SPAG16Q8N0X2 631 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 SVBPQ8N300 66 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 COMMD1Q8N668 190 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 LRTM2Q8N967 370 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 OR4A4PQ8NGN8 299 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 CASTOR1Q8WTX7 329 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 LHX4Q969G2 390 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 GALMQ96C23 342 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 GALNT14Q96FL9 552 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 SEC22AQ96IW7 307 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 RNF126Q9BV68 326 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 PLEKHA2Q9HB19 425 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 OR2S2Q9NQN1 319 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 SIRT7Q9NRC8 400 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 EHFQ9NZC4 300 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 ANXA10Q9UJ72 324 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 HIVEP2P31629 2446 aa10.27□□□□□ -0.77
SF3B3-206ENST00000565990 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 FAM25EA8MYX2 175 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 TRIM77I1YAP6 450 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 YPEL1O60688 119 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 ATG12O94817 140 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 IFNA2P01563 188 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 IFNA21P01568 189 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 IGHV4-38-2P0DP08 117 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 PGAM2P15259 253 aa10.26□□□□□ -0.77
SF3B3-206ENST00000565990 ZNF134P52741 427 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms