RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 VDAC1P21796 283 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 NFYAP23511 347 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-212ENST00000565517 LGALS7P47929 136 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 TAS2R20P59543 309 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 ARPC4P59998 168 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
COMMD4-212ENST00000565517 ZNF660Q6AZW8 331 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-212ENST00000565517 MZT2AQ6P582 158 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 ZNF645Q8N7E2 425 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 AP3S1Q92572 193 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 C5orf30Q96GV9 206 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 OR51J1Q9H342 316 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 SMIM31A0A1B0GVY4 71 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 IGHG4P01861 327 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 EIF4EP06730 217 aaKnown RBP12.12□□□□□ -0.47
COMMD4-212ENST00000565517 ELANEP08246 267 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 PTHLHP12272 177 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-212ENST00000565517 SLC6A1P30531 599 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 DUTP33316 252 aaKnown RBP12.12□□□□□ -0.47
COMMD4-212ENST00000565517 CFHR3Q02985 330 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 FOXE3Q13461 319 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 PSG5Q15238 335 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 OR5AP2Q8NGF4 316 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 DDB2Q92466 427 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 FBXL15Q9H469 300 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 ANAPC10Q9UM13 185 aa12.12□□□□□ -0.47
COMMD4-212ENST00000565517 A0A1W2PRX2 142 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 PRSS3P35030 304 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
COMMD4-212ENST00000565517 CRIP2P52943 208 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-212ENST00000565517 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
COMMD4-212ENST00000565517 CBX3Q13185 183 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 PLGLAQ15195 96 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 MSMO1Q15800 293 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 RTL8BQ17RB0 113 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 TMEM177Q53S58 311 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
COMMD4-212ENST00000565517 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
COMMD4-212ENST00000565517 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 J3QRK9 145 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 ATP6V0E1O15342 81 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 PF4V1P10720 104 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 NAT1P18440 290 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 PPIFP30405 207 aaKnown RBP12.1□□□□□ -0.47
COMMD4-212ENST00000565517 FCGR2CP31995 323 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 TMBIM6P55061 237 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 CX3CL1P78423 397 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-212ENST00000565517 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 ZNF562Q6V9R5 426 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 BVESQ8NE79 360 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 RAB2BQ8WUD1 216 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 GIMAP1Q8WWP7 306 aa12.1□□□□□ -0.47
COMMD4-212ENST00000565517 RBMX2Q9Y388 322 aaKnown RBP12.1□□□□□ -0.47
COMMD4-212ENST00000565517 LINC00473A8K010 186 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 FCN1O00602 326 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 HPGDSO60760 199 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 ELK1P19419 428 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 PSMB8P28062 276 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 CDX1P47902 265 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-212ENST00000565517 CDK10Q15131 360 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 CLVS1Q8IUQ0 354 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-212ENST00000565517 TCTEX1D1Q8N7M0 179 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 OSR1Q8TAX0 266 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-212ENST00000565517 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 HARBI1Q96MB7 349 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
COMMD4-212ENST00000565517 SCPEP1Q9HB40 452 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 PARP11Q9NR21 331 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 PRELID3BQ9Y3B1 194 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
COMMD4-212ENST00000565517 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 MEIS3P1A6NDR6 274 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 SULT1C2O00338 296 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 SHOXO15266 292 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 SLC25A17O43808 307 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 TPPPO94811 219 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 PPYP01298 95 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 CRYGBP07316 175 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 AADACP22760 399 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 TAS2R46P59540 309 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 TMEM267Q0VDI3 215 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-212ENST00000565517 EIF4EBP1Q13541 118 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-212ENST00000565517 C19orf54Q5BKX5 351 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 DHRS11Q6UWP2 260 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 ZNF66Q6ZN08 573 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 ZBTB34Q8NCN2 500 aa12.08□□□□□ -0.48
COMMD4-212ENST00000565517 ADAM30Q9UKF2 790 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 571.1 ms