RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PSMD13Q9UNM6 376 aa1.73□□□□□ -2.13
CHD9-215ENST00000565442 CFTRP13569 1480 aa1.73□□□□□ -2.13
CHD9-215ENST00000565442 MRC2Q9UBG0 1479 aa1.73□□□□□ -2.13
CHD9-215ENST00000565442 RAPGEF2Q9Y4G8 1499 aa1.73□□□□□ -2.13
CHD9-215ENST00000565442 WRNQ14191 1432 aaPredicted RBP eCLIP1.73□□□□□ -2.13
CHD9-215ENST00000565442 MPDZO75970 2070 aa1.73□□□□□ -2.13
CHD9-215ENST00000565442 PIK3R4Q99570 1358 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 COL5A3P25940 1745 aaPredicted RBP1.72□□□□□ -2.13
CHD9-215ENST00000565442 CUL7Q14999 1698 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 SNAPC4Q5SXM2 1469 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 TRAV8-1A0A0A6YYK1 113 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 TINCRA0A1B0GVN0 87 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 MDFIC2A0A1B0GVS7 189 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 GRIFINA4D1Z8 144 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 C11orf86A6NJI1 115 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 OR11H12B2RN74 326 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 H3BRN7 92 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 SLC17A3O00476 420 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 UGT2B7P16662 529 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 ALOX5APP20292 161 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 GNA13Q14344 377 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 AMTNQ6UX39 209 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 BAP18Q8IXM2 172 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 C1orf174Q8IYL3 243 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 OR11H2Q8NH07 326 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 SLC22A4Q9H015 551 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 CXCL16Q9H2A7 254 aa1.72□□□□□ -2.13
CHD9-215ENST00000565442 IMP3Q9NV31 184 aaKnown RBP1.72□□□□□ -2.13
CHD9-215ENST00000565442 COL4A2P08572 1712 aa1.71□□□□□ -2.13
CHD9-215ENST00000565442 ARHGAP32A7KAX9 2087 aa1.71□□□□□ -2.13
CHD9-215ENST00000565442 CFAP43Q8NDM7 1665 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 KIF21BO75037 1637 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 KIF14Q15058 1648 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 M0R381 172 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 UBE2L6O14933 153 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 BIRC5O15392 142 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 COCHO43405 550 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 HIST1H1CP16403 213 aaKnown RBP1.71□□□□□ -2.14
CHD9-215ENST00000565442 IFNGR2P38484 337 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 GLT6D1Q7Z4J2 308 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 LRRC34Q8IZ02 419 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 OR2D3Q8NGH3 330 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 ASB13Q8WXK3 278 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 EMC3Q9P0I2 261 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 SUPT6HQ7KZ85 1726 aaKnown RBP1.71□□□□□ -2.14
CHD9-215ENST00000565442 PLXNA3P51805 1871 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 A0A1W2PP64 1363 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 CDK13Q14004 1512 aaKnown RBP1.71□□□□□ -2.14
CHD9-215ENST00000565442 MAGI3Q5TCQ9 1506 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 OTOGLQ3ZCN5 2332 aa1.71□□□□□ -2.14
CHD9-215ENST00000565442 ARAP1Q96P48 1450 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 A0A0G2JQZ4 141 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 OR5K4A6NMS3 321 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 GOLGA8KD6RF30 607 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 GOLGA8MH3BSY2 632 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 GNRH2O43555 120 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 DSCAMO60469 2012 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 IGHV1-69P01742 117 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 IL6P05231 212 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 RPL14P50914 215 aaKnown RBP1.7□□□□□ -2.14
CHD9-215ENST00000565442 FABP5Q01469 135 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.7□□□□□ -2.14
CHD9-215ENST00000565442 FAM19A5Q7Z5A7 132 aaPredicted RBP1.7□□□□□ -2.14
CHD9-215ENST00000565442 SLC35F6Q8N357 371 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 CNEP1R1Q8N9A8 125 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 OR4X1Q8NH49 305 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 RPS4Y2Q8TD47 263 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 TMBIM1Q969X1 311 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 SMIM19Q96E16 107 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 MIEN1Q9BRT3 115 aa1.7□□□□□ -2.14
CHD9-215ENST00000565442 NKX6-2Q9C056 277 aaPredicted RBP1.7□□□□□ -2.14
CHD9-215ENST00000565442 PCYT1BQ9Y5K3 369 aaPredicted RBP1.7□□□□□ -2.14
CHD9-215ENST00000565442 RIMBP3CA6NJZ7 1639 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 RIMBP3BA6NNM3 1639 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 KIAA0556O60303 1618 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 RIMBP3Q9UFD9 1639 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 SAMD9Q5K651 1589 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 COL11A1P12107 1806 aaPredicted RBP1.69□□□□□ -2.14
CHD9-215ENST00000565442 IGHV3-15A0A0B4J1V0 119 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 C1orf232A0A0U1RR37 186 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 TMEM235A6NFC5 223 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 F5H768 121 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 ITGB1BP1O14713 200 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 S1PR2O95136 353 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 YEATS4O95619 227 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 CD79BP40259 229 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 HINT1P49773 126 aaPredicted RBP1.69□□□□□ -2.14
CHD9-215ENST00000565442 TMEM33P57088 247 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 AGTRAPQ6RW13 159 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 FAM9CQ8IZT9 166 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 TMEM251Q8N6I4 163 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 PACRGLQ8N7B6 248 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 DAND5Q8N907 189 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 OR4X2Q8NGF9 303 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 DHRS9Q9BPW9 319 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 LLPHQ9BRT6 129 aaKnown RBP1.69□□□□□ -2.14
CHD9-215ENST00000565442 TMEM109Q9BVC6 243 aa1.69□□□□□ -2.14
CHD9-215ENST00000565442 ZNF471Q9BX82 626 aaPredicted RBP1.69□□□□□ -2.14
CHD9-215ENST00000565442 DERL2Q9GZP9 239 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms