RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ARSBP15848 533 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 TPPP2P59282 170 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 PJVKQ0ZLH3 352 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 FXYD3Q14802 87 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 P2RY14Q15391 338 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 MRGPRG-AS1Q2M3A8 158 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 PLAC9Q5JTB6 97 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 LIPKQ5VXJ0 399 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 IL34Q6ZMJ4 242 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 MOB1BQ7L9L4 216 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 ABHD5Q8WTS1 349 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 TMEM203Q969S6 136 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 FLYWCH2Q96CP2 140 aaKnown RBP6.57□□□□□ -1.36
CAPN3-213ENST00000565173 ARHGAP5-AS1Q96IT6 56 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 OR4C12Q96R67 309 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 TSNAXQ99598 290 aaKnown RBP6.57□□□□□ -1.36
CAPN3-213ENST00000565173 SLA2Q9H6Q3 261 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 C19orf73Q9NVV2 129 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 GAR1Q9NY12 217 aaKnown RBP6.57□□□□□ -1.36
CAPN3-213ENST00000565173 KCNK7Q9Y2U2 307 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 SRRM4A7MD48 611 aaKnown RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 LDLRAD4O15165 306 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 HSPA12AO43301 675 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 SLC25A17O43808 307 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 MRPS14O60783 128 aaKnown RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 BRI3O95415 125 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 LYL1P12980 280 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 CPEP16870 476 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 CD40LGP29965 261 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 VEGFCP49767 419 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 RPS16P62249 146 aaKnown RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 PITPNAQ00169 270 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 PLA2G7Q13093 441 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 TPBGQ13641 420 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 KLF5Q13887 457 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 TBCEQ15813 527 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 POC5Q8NA72 575 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 OR5T1Q8NG75 326 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 UFD1Q92890 307 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 CITED4Q96RK1 184 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 URM1Q9BTM9 101 aaKnown RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 PECRQ9BY49 303 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 ZMAT4Q9H898 229 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 EDA2RQ9HAV5 297 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 RANGRFQ9HD47 186 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 ACOT13Q9NPJ3 140 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 C12orf4Q9NQ89 552 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 RDH8Q9NYR8 311 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 MGAT4AQ9UM21 535 aa6.56□□□□□ -1.36
CAPN3-213ENST00000565173 AK6Q9Y3D8 172 aaKnown RBP6.56□□□□□ -1.36
CAPN3-213ENST00000565173 TRDCB7Z8K6 153 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 H3BUA1 57 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 RBMXL2O75526 392 aaKnown RBP6.55□□□□□ -1.36
CAPN3-213ENST00000565173 CD3GP09693 182 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 CLDN12P56749 244 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 RPS25P62851 125 aaKnown RBP6.55□□□□□ -1.36
CAPN3-213ENST00000565173 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
CAPN3-213ENST00000565173 C2orf76Q3KRA6 126 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 KCTD21Q4G0X4 260 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF773Q6PK81 442 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF367Q7RTV3 350 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 PDPNQ86YL7 162 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 SPARTQ8N0X7 666 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-213ENST00000565173 GRPEL2Q8TAA5 225 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 C5orf30Q96GV9 206 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 MGLLQ99685 303 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 CMSS1Q9BQ75 279 aaKnown RBP6.55□□□□□ -1.36
CAPN3-213ENST00000565173 THAP7Q9BT49 309 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-213ENST00000565173 ELOVL1Q9BW60 279 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 PLGRKTQ9HBL7 147 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 SDHAF2Q9NX18 166 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF221Q9UK13 617 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 STUB1Q9UNE7 303 aa6.55□□□□□ -1.36
CAPN3-213ENST00000565173 TMEM272A0A1B0GTI8 110 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 C13orf42A0A1B0GVH6 325 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 M0R1X1 148 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 TNFAIP8O95379 198 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 CNIH1O95406 144 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 TRBV12-3P01733 135 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 GSTT2P0CG29 244 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 GSTT2BP0CG30 244 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 ZP3P21754 424 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 PSMB9P28065 219 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 LGALS7P47929 136 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 MECP2P51608 486 aaKnown RBP6.54□□□□□ -1.36
CAPN3-213ENST00000565173 FABP5Q01469 135 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 MLLT11Q13015 90 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-213ENST00000565173 DYRK1AQ13627 763 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 RAB11BQ15907 218 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 MOGAT2Q3SYC2 334 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 IGSF11Q5DX21 431 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF343Q6P1L6 599 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 ANKRD13BQ86YJ7 626 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 OR4A4PQ8NGN8 299 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 OR9G4Q8NGQ1 327 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 FCGR1BQ92637 280 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 FAM3DQ96BQ1 224 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms