RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 NPBQ8NG41 125 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 OR4F17Q8NGA8 305 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 AP3S1Q92572 193 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 FLYWCH2Q96CP2 140 aaKnown RBP7.84□□□□□ -1.15
CDH1-206ENST00000564676 CMTM3Q96MX0 182 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 OR4F4Q96R69 305 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 TSNAXQ99598 290 aaKnown RBP7.84□□□□□ -1.15
CDH1-206ENST00000564676 RNF5Q99942 180 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 HSPB9Q9BQS6 159 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 GON7Q9BXV9 100 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 FBXL15Q9H469 300 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 IFT46Q9NQC8 304 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 MRPS7Q9Y2R9 242 aaKnown RBP7.84□□□□□ -1.15
CDH1-206ENST00000564676 OR2W1Q9Y3N9 320 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 CMYA5Q8N3K9 4069 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 ADARB2-AS1A8MUL3 147 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 FAM25AB3EWG3 89 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 FAM25CB3EWG5 89 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 FAM25GB3EWG6 89 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 RRHO14718 337 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 HPGDSO60760 199 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 NDUFA3O95167 84 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 APOA1P02647 267 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 EIF4EP06730 217 aaKnown RBP7.83□□□□□ -1.16
CDH1-206ENST00000564676 PF4V1P10720 104 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 ZNF182P17025 639 aaPredicted RBP7.83□□□□□ -1.16
CDH1-206ENST00000564676 PRSS3P35030 304 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 RPL5P46777 297 aaKnown RBP7.83□□□□□ -1.16
CDH1-206ENST00000564676 CBX3Q13185 183 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 RTL8BQ17RB0 113 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 COMMD1Q8N668 190 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 ADTRPQ96IZ2 230 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 OR51J1Q9H342 316 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 NECAP2Q9NVZ3 263 aa7.83□□□□□ -1.16
CDH1-206ENST00000564676 IGHV7-81A0A0B4J1V7 117 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 NOL3O60936 208 aaKnown RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 TUSC2O75896 110 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 SLC22A5O76082 557 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 HLA-DRB1P01911 266 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 HLA-DQB1P01920 261 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 IGKV1-16P04430 117 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 OR5H8P0DN80 308 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 RRASP10301 218 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 FCGR2CP31995 323 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 DUTP33316 252 aaKnown RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 TAGLNQ01995 201 aaKnown RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 PSG5Q15238 335 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 CXorf66Q5JRM2 361 aaPredicted RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 ZNF660Q6AZW8 331 aaPredicted RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 TEX38Q6PEX7 206 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 ZNF645Q8N7E2 425 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 BVESQ8NE79 360 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 ABHD5Q8WTS1 349 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 C5orf30Q96GV9 206 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 CLCC1Q96S66 551 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 PARP11Q9NR21 331 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 ZFP57Q9NU63 452 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 METTL1Q9UBP6 276 aaKnown RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 RBMX2Q9Y388 322 aaKnown RBP7.82□□□□□ -1.16
CDH1-206ENST00000564676 WSB1Q9Y6I7 421 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
CDH1-206ENST00000564676 IGKV1D-13A0A0B4J2D9 117 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 NUDT19A8MXV4 375 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 FCN1O00602 326 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SHOXO15266 292 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 ATP6V0E1O15342 81 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SLC25A17O43808 307 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SPDEFO95238 335 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 PF4P02776 101 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 IGF1P05019 195 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 IGKV1-13P0DP09 117 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 ELK1P19419 428 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 AADACP22760 399 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 LGALS7P47929 136 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 RPL23AP62750 156 aaKnown RBP7.81□□□□□ -1.16
CDH1-206ENST00000564676 SPCS2Q15005 226 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 CDK10Q15131 360 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SNX29P2Q8IUI4 249 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 OR5AP2Q8NGF4 316 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 RAB2BQ8WUD1 216 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SECTM1Q8WVN6 248 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SNAPC3Q92966 411 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 HARBI1Q96MB7 349 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 DCUN1D5Q9BTE7 237 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 EHFQ9NZC4 300 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 SCOCQ9UIL1 159 aa7.81□□□□□ -1.16
CDH1-206ENST00000564676 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 LINC00473A8K010 186 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 G3V318 75 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 FCGR3BO75015 233 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 CRYZL1O95825 349 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 PPYP01298 95 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 PMP2P02689 132 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 ELANEP08246 267 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 TMBIM6P55061 237 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 TAS2R46P59540 309 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 FXYD4P59646 89 aa7.8□□□□□ -1.16
CDH1-206ENST00000564676 HERV-K104P61576 105 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms