RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KPRPQ5T749 579 aaPredicted RBP14.38□□□□□ -0.11
SYNGR3-204ENST00000564642 CNIH2Q6PI25 160 aa14.38□□□□□ -0.11
SYNGR3-204ENST00000564642 TMEM65Q6PI78 240 aa14.38□□□□□ -0.11
SYNGR3-204ENST00000564642 LCNL1Q6ZST4 164 aa14.38□□□□□ -0.11
SYNGR3-204ENST00000564642 CLCC1Q96S66 551 aa14.38□□□□□ -0.11
SYNGR3-204ENST00000564642 TRAV41A0A0B4J266 112 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 TRIM64CA6NLI5 447 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 G3V318 75 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 J3QRK9 145 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 SSX5O60225 188 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 MYCNOSP40205 109 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 CDX1P47902 265 aaPredicted RBP14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 CX3CL1P78423 397 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 TAGLNQ01995 201 aaKnown RBP14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 PSG5Q15238 335 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 RNF152Q8N8N0 203 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 ABHD5Q8WTS1 349 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 RCC1LQ96I51 464 aaKnown RBP14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 ANXA10Q9UJ72 324 aa14.37□□□□□ -0.11
SYNGR3-204ENST00000564642 FCN1O00602 326 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 SPDEFO95238 335 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 DUS4LO95620 317 aaKnown RBP14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 NFYAP23511 347 aaPredicted RBP14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 PSMB8P28062 276 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 PPIFP30405 207 aaKnown RBP14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 LUMP51884 338 aaPredicted RBP14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 ETV3LQ6ZN32 361 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 S100A16Q96FQ6 103 aaKnown RBP14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 ADTRPQ96IZ2 230 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 FUNDC2Q9BWH2 189 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 OR2W1Q9Y3N9 320 aa14.36□□□□□ -0.11
SYNGR3-204ENST00000564642 RRASP10301 218 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 LGALS7P47929 136 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 ARPC4P59998 168 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 TMEM267Q0VDI3 215 aaPredicted RBP14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 RTL8BQ17RB0 113 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 ECSCRQ19T08 205 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 ZNF562Q6V9R5 426 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 MRPL41Q8IXM3 137 aaKnown RBP14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 LINC00482Q8N8I6 264 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 BVESQ8NE79 360 aa14.35□□□□□ -0.11
SYNGR3-204ENST00000564642 CCL24O00175 119 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 SLC25A17O43808 307 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 SLC22A5O76082 557 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 UBE2NLQ5JXB2 153 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 ZNF645Q8N7E2 425 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 BEST4Q8NFU0 473 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 C5orf30Q96GV9 206 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 DUX3Q96PT4 197 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 AUNIPQ9H7T9 357 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 A3GALT2U3KPV4 340 aa14.34□□□□□ -0.11
SYNGR3-204ENST00000564642 A0A1W2PN81 502 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 SHOXO15266 292 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 XRCC3O43542 346 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 CA2P00918 260 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 IGLV1-40P01703 118 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 HLA-DQB1P01920 261 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 PRB2P02812 416 aaPredicted RBP14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 DUTP33316 252 aaKnown RBP14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 CHRNA7P36544 502 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 CBX5P45973 191 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 CRIP2P52943 208 aaPredicted RBP14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 RAB25P57735 213 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 NDPQ00604 133 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 FOXB2Q5VYV0 432 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 REC114Q7Z4M0 266 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 PPP1R27Q86WC6 154 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 GVQW1Q8N7I0 195 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 TCTEX1D1Q8N7M0 179 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 SAMD12Q8N8I0 201 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 MINDY2Q8NBR6 621 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 OR13F1Q8NGS4 319 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 C4orf3Q8WVX3 66 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 SLC25A46Q96AG3 418 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 RAX2Q96IS3 184 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 HARBI1Q96MB7 349 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 P2RX4Q99571 388 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 NECAP2Q9NVZ3 263 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 FBXO7Q9Y3I1 522 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 NUBP2Q9Y5Y2 271 aa14.33□□□□□ -0.12
SYNGR3-204ENST00000564642 RAB9AP51151 201 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 VBP1P61758 197 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 NCS1P62166 190 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 TMEM177Q53S58 311 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 UNQ5815/PRO19632Q6UWF5 114 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 KCTD12Q96CX2 325 aaKnown RBP14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 UBE2E2Q96LR5 201 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 FAM103A1Q9BTL3 118 aaKnown RBP14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 KLK15Q9H2R5 256 aa14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 FOXA2Q9Y261 457 aaPredicted RBP14.32□□□□□ -0.12
SYNGR3-204ENST00000564642 LINC00473A8K010 186 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 TUSC2O75896 110 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 CNIH1O95406 144 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 IGLV2-23P01705 113 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 EGR2P11161 476 aaPredicted RBP14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 PTHLHP12272 177 aa14.31□□□□□ -0.12
SYNGR3-204ENST00000564642 FXYD3Q14802 87 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms