RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 AARDQ4LEZ3 155 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 COA6Q5JTJ3 125 aaKnown RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 PRAMEF5Q5TYX0 476 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 PRAMEF6Q5VXH4 476 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 WDR25Q64LD2 544 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 FAM180AQ6UWF9 173 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 ETV3LQ6ZN32 361 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 SSX9Q7RTT3 188 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 OR4F5Q8NH21 305 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 KLF14Q8TD94 323 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 RAB24Q969Q5 203 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 PACRGQ96M98 296 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 OR4F4Q96R69 305 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 S1PR3Q99500 378 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 RSG1Q9BU20 258 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 NPCDR1Q9BY65 106 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 ZNF665Q9H7R5 613 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 NPVFQ9HCQ7 196 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 ZNF581Q9P0T4 197 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 GNG12Q9UBI6 72 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 PROCRQ9UNN8 238 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 URGCP-MRPS24S4R325 110 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 EML6Q6ZMW3 1958 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 TRBV9A0A0B4J1U6 114 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 ODAMA1E959 279 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 MARCH11A6NNE9 402 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 ADARB2-AS1A8MUL3 147 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 C12orf77C9JDV5 145 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 C11orf94C9JXX5 98 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 RHBDL1O75783 438 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PDGFBP01127 241 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-249ENST00000564606 IGKV3-15P01624 115 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 IGHV2-70P01814 119 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 TRGC1P0CF51 173 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 TMPRSS3P57727 454 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 TAS2R45P59539 299 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 RHOBP62745 196 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 FOXL1Q12952 345 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PSG7Q13046 419 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 DAZAP2Q15038 168 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-249ENST00000564606 IQCJQ1A5X6 159 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 Q3ZCU0 254 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 NCMAPQ5T1S8 102 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 C20orf204Q6ZNR8 217 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 Q6ZPA2 131 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 C8orf86Q6ZUL3 223 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 GCNT2Q8N0V5 402 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 HIST3H2BBQ8N257 126 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 OR10D4PQ8NGN7 298 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 R3HDM4Q96D70 268 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 FGF23Q9GZV9 251 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-249ENST00000564606 DEFB127Q9H1M4 99 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 ARRDC1-AS1Q9H2J1 176 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PARLQ9H300 379 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 HEYLQ9NQ87 328 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PRDM6Q9NQX0 595 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PLSCR4Q9NRQ2 329 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 TMEM167BQ9NRX6 74 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PLA2G3Q9NZ20 509 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 CLCF1Q9UBD9 225 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 PRNDQ9UKY0 176 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 TP53TG5Q9Y2B4 290 aa6.41□□□□□ -1.38
ATXN3-249ENST00000564606 TGIF2-C20orf24A0A0A6YYL0 155 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 A0A0G2JRQ6 117 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 TM4SF5O14894 197 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 GGCTO75223 188 aaKnown RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 IGKV1-39P01597 117 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 GYPAP02724 150 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 IGKV1D-39P04432 117 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 CELA3AP09093 270 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 P0C879 139 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 IGHV1-2P23083 117 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 PRDX2P32119 198 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 G6PCP35575 357 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 TNFSF10P50591 281 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 ERVFRD-1P60508 538 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 RANP62826 216 aaKnown RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 RPL23P62829 140 aaKnown RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 PAFAH1B2P68402 229 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 JOSD1Q15040 202 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 CR1LQ2VPA4 569 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 OR2B11Q5JQS5 317 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 C16orf82Q7Z2V1 217 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 MRPL52Q86TS9 123 aaKnown RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 ODF3L1Q8IXM7 274 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 RPP25LQ8N5L8 163 aaKnown RBP6.4□□□□□ -1.38
ATXN3-249ENST00000564606 OR51G1Q8NGK1 321 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 OR1P1Q8NH06 330 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 TMEM170AQ8WVE7 144 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 SLC35E1Q96K37 410 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 ZNF488Q96MN9 340 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 TRIB1Q96RU8 372 aa6.4□□□□□ -1.38
ATXN3-249ENST00000564606 CHRDL1Q9BU40 450 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms