RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 H3BUA1 57 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 RAB27BO00194 218 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 PDCD5O14737 125 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 FABP7O15540 132 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 BRI3O95415 125 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 CRYGBP07316 175 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 CD40LGP29965 261 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 LGALS7P47929 136 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 SLURP1P55000 103 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 RPS16P62249 146 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 SSBP2P81877 361 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 PLA2G7Q13093 441 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 ZNF367Q7RTV3 350 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 CASTOR1Q8WTX7 329 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 ARPC1AQ92747 370 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 FAM103A1Q9BTL3 118 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 VCX3BQ9H321 246 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 A3GALT2U3KPV4 340 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 RYR3Q15413 4870 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 IFITM5A6NNB3 132 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 M0R1X1 148 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 MFNGO00587 321 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 IGLV2-23P01705 113 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 FCGR3AP08637 254 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 CD3GP09693 182 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 SNRPBP14678 240 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 RAB6AP20340 208 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 GALP22466 123 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 HSPA13P48723 471 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 FXYD3Q14802 87 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 MOGAT2Q3SYC2 334 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 HES5Q5TA89 166 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 Q6ZS49 121 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 OR10R2Q8NGX6 335 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 ABHD5Q8WTS1 349 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 TMEM68Q96MH6 324 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 CLCC1Q96S66 551 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 CENPOQ9BU64 300 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 SLC35D1Q9NTN3 355 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 NDUFB11Q9NX14 153 aa13.26□□□□□ -0.29
VPS9D1-203ENST00000563798 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 TRDV1A0A1B0GX56 115 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 SHISA3A0PJX4 238 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 SLC25A17O43808 307 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 SAP30O75446 220 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 OR8U9P0C7N5 309 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 MRPS15P82914 257 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 TMEM177Q53S58 311 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 IGSF11Q5DX21 431 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 OR6Q1Q8NGQ2 317 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 OR10J5Q8NHC4 309 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 SDHAF2Q9NX18 166 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 BLOC1S6Q9UL45 172 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 SORL1Q92673 2214 aa13.25□□□□□ -0.29
VPS9D1-203ENST00000563798 LY86O95711 162 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 GSTT2BP0CG30 244 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 SPNP16150 400 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 GADD45AP24522 165 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 OR10A3P58181 314 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 TPPP2P59282 170 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 POC5Q8NA72 575 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 C5orf30Q96GV9 206 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 OR2D2Q9H210 308 aa13.24□□□□□ -0.29
VPS9D1-203ENST00000563798 BET1O15155 118 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 MRPS14O60783 128 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 IGHV3-11P01762 117 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 TRGV3P03979 118 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 RRASP10301 218 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 GP9P14770 177 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 IZUMO2Q6UXV1 221 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 ASCL2Q99929 193 aa13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 RANGRFQ9HD47 186 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-203ENST00000563798 A0A0G2JLM5 398 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 METTL21EPA6NDL7 271 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 GNB3P16520 340 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 RAB3BP20337 219 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 MYL9P24844 172 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 PITPNAQ00169 270 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 ARL6IP1Q15041 203 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 MRGPRG-AS1Q2M3A8 158 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 GRPEL2Q8TAA5 225 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 DDB2Q92466 427 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
VPS9D1-203ENST00000563798 SRRM4A7MD48 611 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 CNIH1O95406 144 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 ZP3P21754 424 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 PJVKQ0ZLH3 352 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 H1FOOQ8IZA3 346 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 TEX45Q8NA69 505 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 ADTRPQ96IZ2 230 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 CNBD2Q96M20 576 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 HARBI1Q96MB7 349 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 ELOVL1Q9BW60 279 aa13.21□□□□□ -0.29
VPS9D1-203ENST00000563798 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms