RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 CTF1Q16619 201 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 PNLIPRP3Q17RR3 467 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 IDNKQ5T6J7 187 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 LCNL1Q6ZST4 164 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 OR10J5Q8NHC4 309 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 P2RX4Q99571 388 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 TSC22D3Q99576 134 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 RNF5Q99942 180 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 OR51J1Q9H342 316 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 ZFP57Q9NU63 452 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 WASHC3Q9Y3C0 194 aa11.57□□□□□ -0.56
RPUSD1-204ENST00000563560 G3V318 75 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 ATP6V0E1O15342 81 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 TUSC2O75896 110 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 OR8U9P0C7N5 309 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 THBS3P49746 956 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 ARFRP1Q13795 201 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 TEX38Q6PEX7 206 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 MINDY2Q8NBR6 621 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 NAA50Q9GZZ1 169 aaKnown RBP11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 FBXL15Q9H469 300 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 AUNIPQ9H7T9 357 aa11.56□□□□□ -0.56
RPUSD1-204ENST00000563560 COL7A1Q02388 2944 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 IGKV1D-13A0A0B4J2D9 117 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 SOX15O60248 233 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 HLA-DQB1P01920 261 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 ELANEP08246 267 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 IGKV1-13P0DP09 117 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 SLC6A1P30531 599 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 MRPS15P82914 257 aaKnown RBP11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 PITPNAQ00169 270 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 PSG5Q15238 335 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 LIN54Q6MZP7 749 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 PDPNQ86YL7 162 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 SLC25A46Q96AG3 418 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 ANXA10Q9UJ72 324 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 ANAPC10Q9UM13 185 aa11.55□□□□□ -0.56
RPUSD1-204ENST00000563560 TRAV18A0A075B6X5 111 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 SRRM4A7MD48 611 aaKnown RBP11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 LINC00473A8K010 186 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 M0R1X1 148 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 SPDEFO95238 335 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 PTHLHP12272 177 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 CDX1P47902 265 aaPredicted RBP11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 NCS1P62166 190 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 LSM3P62310 102 aaKnown RBP11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 SLC35B1P78383 322 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 CX3CL1P78423 397 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 CNIH2Q6PI25 160 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 C8orf86Q6ZUL3 223 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 MRPL41Q8IXM3 137 aaKnown RBP11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 SNAPC3Q92966 411 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 RAX2Q96IS3 184 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 ST6GALNAC5Q9BVH7 336 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 KLK15Q9H2R5 256 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 ZNF221Q9UK13 617 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 NUBP2Q9Y5Y2 271 aa11.54□□□□□ -0.56
RPUSD1-204ENST00000563560 ARPC1BO15143 372 aaKnown RBP11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 XRCC3O43542 346 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 TALDO1P37837 337 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 BRWD1-AS2P59051 145 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 FHL3Q13643 280 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 ZNF660Q6AZW8 331 aaPredicted RBP11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 HOGA1Q86XE5 327 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 CROCCP3Q8IVE0 287 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 ZNF695Q8IW36 515 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 GON7Q9BXV9 100 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
RPUSD1-204ENST00000563560 I3L521 148 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 IGLL1P15814 213 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 VBP1P61758 197 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 LINC00299Q6ZSB3 139 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 DCUN1D5Q9BTE7 237 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 WSB1Q9Y6I7 421 aa11.52□□□□□ -0.57
RPUSD1-204ENST00000563560 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 H7C2Y5 167 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 CTXN2P0C2S0 81 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 OR5H8P0DN80 308 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 PF4V1P10720 104 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 ZNF182P17025 639 aaPredicted RBP11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 MYCNOSP40205 109 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 GNG2P59768 71 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 RPL30P62888 115 aaKnown RBP11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 RUNX1Q01196 453 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 SPCS2Q15005 226 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 KHDC1LQ5JSQ8 128 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 UBE2NLQ5JXB2 153 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 ZNF562Q6V9R5 426 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 OVCH2Q7RTZ1 564 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 ZNF645Q8N7E2 425 aa11.51□□□□□ -0.57
RPUSD1-204ENST00000563560 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms