RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 ARPC1BO15143 372 aaKnown RBP12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 RBBP9O75884 186 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 ARL6IP5O75915 188 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 IGLV1-51P01701 117 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 UCHL1P09936 223 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 CD37P11049 281 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 MC5RP33032 325 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 SSBP2P81877 361 aaPredicted RBP12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 TIMM50Q3ZCQ8 353 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 TMEM91Q6ZNR0 172 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 ZNF383Q8NA42 475 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 OR13F1Q8NGS4 319 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 FLYWCH2Q96CP2 140 aaKnown RBP12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 RNF5Q99942 180 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 EDA2RQ9HAV5 297 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 AK3Q9UIJ7 227 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
HDGFL3-203ENST00000563404 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 SLC22A1O15245 554 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 SOCS1O15524 211 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 TRGV3P03979 118 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 CD36P16671 472 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 CEACAM6P40199 344 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 CEACAM19Q7Z692 300 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 KCNG3Q8TAE7 436 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 TMEM203Q969S6 136 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 LPAR5Q9H1C0 372 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 PLEKHJ1Q9NW61 149 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
HDGFL3-203ENST00000563404 FOXI3A8MTJ6 420 aaPredicted RBP12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 LDLRAD4O15165 306 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 HSPA12AO43301 675 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 SCTP09683 121 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 HLA-DRB3P79483 266 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 FABP5Q01469 135 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 MOB1BQ7L9L4 216 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 GFI1Q99684 422 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 RSRP1Q9BUV0 290 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 SLA2Q9H6Q3 261 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 PLECQ15149 4684 aaKnown RBP12.85□□□□□ -0.35
HDGFL3-203ENST00000563404 TRAV1-2A0A0B4J238 106 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 IGKV1-6A0A0C4DH72 117 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 A8MZ25 164 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 SRMP19623 302 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 RANBP1P43487 201 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 PSMD7P51665 324 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 FXYD3Q14802 87 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 IL34Q6ZMJ4 242 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 GRPEL2Q8TAA5 225 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 PTX4Q96A99 478 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 Q9N2K0 584 aa12.84□□□□□ -0.35
HDGFL3-203ENST00000563404 SLC25A17O43808 307 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 SPDEFO95238 335 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 BPNT1O95861 308 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 ZBTB25P24278 435 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 TMEM50BP56557 158 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 RPS16P62249 146 aaKnown RBP12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 DEFA5Q01523 94 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 PJVKQ0ZLH3 352 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 P2RY14Q15391 338 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 FAM89BQ8N5H3 189 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 POC5Q8NA72 575 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 EDARADDQ8WWZ3 215 aa12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 TSNAXQ99598 290 aaKnown RBP12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
HDGFL3-203ENST00000563404 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 IGLV2-23P01705 113 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 CD40LGP29965 261 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 KLF5Q13887 457 aaPredicted RBP12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 GPR141Q7Z602 305 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 OR6M1Q8NGM8 313 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 RANGRFQ9HD47 186 aaPredicted RBP12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 ZNF355PQ9NSJ1 428 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 TXNL4BQ9NX01 149 aaKnown RBP12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 ADAM30Q9UKF2 790 aa12.82□□□□□ -0.36
HDGFL3-203ENST00000563404 CRYGBP07316 175 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 GADD45AP24522 165 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 TPRA1Q86W33 373 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 ARHGAP5-AS1Q96IT6 56 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 BCL7BQ9BQE9 202 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 THAP7Q9BT49 309 aaPredicted RBP12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 FUNDC2Q9BWH2 189 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 OR51E2Q9H255 320 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 HSF4Q9ULV5 492 aa12.81□□□□□ -0.36
HDGFL3-203ENST00000563404 C13orf42A0A1B0GVH6 325 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms