RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 K7EPK0 472 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 DEDDO75618 318 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 SAA2P0DJI9 122 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 SP5Q6BEB4 398 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 ACOT7LQ6ZUV0 252 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 FAM71E2Q8N5Q1 922 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 EIF4E3Q8N5X7 224 aaKnown RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 SLC25A32Q9H2D1 315 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 PFDN2Q9UHV9 154 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 SESN1Q9Y6P5 492 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 YLPM1P49750 1951 aaKnown RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 KMT2BQ9UMN6 2715 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 RAB29O14966 203 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 PDZD9Q8IXQ8 264 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 TCTEX1D1Q8N7M0 179 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 LSM10Q969L4 123 aaKnown RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 SPIN2AQ99865 258 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 SPIN2BQ9BPZ2 258 aa14.78□□□□□ -0.04
COMMD4-208ENST00000563220 TMA7Q9Y2S6 64 aaKnown RBP14.78□□□□□ -0.04
COMMD4-208ENST00000563220 MSGN1A6NI15 193 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 A8MXK9 166 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 F5H0A9 414 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-208ENST00000563220 S1PR2O95136 353 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 PET100P0DJ07 73 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 IGHV1-8P0DP01 117 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 EPHA1P21709 976 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 CXorf66Q5JRM2 361 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-208ENST00000563220 HSD17B13Q7Z5P4 300 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-208ENST00000563220 ZNF525Q8N782 197 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 INO80EQ8NBZ0 244 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-208ENST00000563220 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-208ENST00000563220 C8orf46Q8TAG6 207 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 CXorf58Q96LI9 332 aa14.77□□□□□ -0.05
COMMD4-208ENST00000563220 FAM212BQ9NTI7 297 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-208ENST00000563220 PPIAL4CA0A0B4J2A2 164 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 PIGBOS1A0A0B4J2F0 54 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 C22orf46C9J442 243 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 BCL2L11O43521 198 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 PITX3O75364 302 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 IGHV4-39P01824 125 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 RLN2P04090 185 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 PPIAL4GP0DN37 164 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 AKR1C2P52895 323 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 LY6G5BQ8NDX9 201 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 ST8SIA2Q92186 375 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 A0A1B0GU03 582 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 KRBOX1C9JBD0 128 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 ST8SIA3O43173 380 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 FGF2P09038 288 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 GNB2P62879 340 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 RNASE11Q8TAA1 199 aaKnown RBP14.76□□□□□ -0.05
COMMD4-208ENST00000563220 DDB2Q92466 427 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 CCL19Q99731 98 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 POMT1Q9Y6A1 747 aa14.76□□□□□ -0.05
COMMD4-208ENST00000563220 A0A087X0M5 115 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 A0A1B0GX30 115 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 KANTRA0A1W2PQU2 76 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 FCGR3BO75015 233 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 KRASP01116 189 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 SLC25A6P12236 298 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 G6PCP35575 357 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 NKX2-1P43699 371 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-208ENST00000563220 DLX1P56177 255 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 ID3Q02535 119 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 SMCO1Q147U7 214 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 DMBX1Q8NFW5 382 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 RAB39BQ96DA2 213 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 CACNG5Q9UF02 275 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 RCL1Q9Y2P8 373 aaKnown RBP14.75□□□□□ -0.05
COMMD4-208ENST00000563220 CHD6Q8TD26 2715 aa14.75□□□□□ -0.05
COMMD4-208ENST00000563220 J3QR06 171 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 NXPH3O95157 252 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 P0C879 139 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 POLR2GP62487 172 aaKnown RBP eCLIP14.74□□□□□ -0.05
COMMD4-208ENST00000563220 ZNF596Q8TC21 504 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 SSBP3Q9BWW4 388 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-208ENST00000563220 ZFP57Q9NU63 452 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 UTP20O75691 2785 aaKnown RBP14.74□□□□□ -0.05
COMMD4-208ENST00000563220 KIAA1324LA8MWY0 1029 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-208ENST00000563220 SPDEFO95238 335 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 HKR1P10072 659 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 COX6B1P14854 86 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 ABHD12Q8N2K0 398 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 LINC00311Q8N616 119 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 ZNF383Q8NA42 475 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 CD300LFQ8TDQ1 290 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 RBMXL1Q96E39 390 aaKnown RBP14.74□□□□□ -0.05
COMMD4-208ENST00000563220 AQP10Q96PS8 301 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 MAGT1Q9H0U3 335 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 C11orf1Q9H5F2 150 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 MMP24Q9Y5R2 645 aa14.74□□□□□ -0.05
COMMD4-208ENST00000563220 FAM208BQ5VWN6 2430 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 CT45A6P0DMU7 189 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 CT45A5P0DMU8 189 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 CT45A7P0DMV0 189 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 NUP62P37198 522 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-208ENST00000563220 PRB3Q04118 309 aaPredicted RBP14.73□□□□□ -0.05
COMMD4-208ENST00000563220 C8orf31Q8N9H6 132 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 S1PR3Q99500 378 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms