RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 OR13C5Q8NGS8 318 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 KCNG3Q8TAE7 436 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 EDARADDQ8WWZ3 215 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 AGMATQ9BSE5 352 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 SLC35D1Q9NTN3 355 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 ZNF221Q9UK13 617 aa13.72□□□□□ -0.21
KATNB1-202ENST00000562542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.71□□□□□ -0.21
KATNB1-202ENST00000562542 PPP5D1E7EU14 171 aa13.71□□□□□ -0.21
KATNB1-202ENST00000562542 HLA-AP01891 365 aaKnown RBP13.71□□□□□ -0.21
KATNB1-202ENST00000562542 CBLN1P23435 193 aa13.71□□□□□ -0.21
KATNB1-202ENST00000562542 TM4SF20Q53R12 229 aa13.71□□□□□ -0.21
KATNB1-202ENST00000562542 C11orf54Q9H0W9 315 aaPredicted RBP13.71□□□□□ -0.21
KATNB1-202ENST00000562542 AMBNQ9NP70 447 aa13.71□□□□□ -0.21
KATNB1-202ENST00000562542 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
KATNB1-202ENST00000562542 TRAV8-7A0A075B6U6 113 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 CEACAM6P40199 344 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 GYS2P54840 703 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 CCDC58Q4VC31 144 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 SVOPQ8N4V2 548 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 HARBI1Q96MB7 349 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 FAAP24Q9BTP7 215 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 OR1A1Q9P1Q5 309 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 AP4S1Q9Y587 144 aa13.7□□□□□ -0.22
KATNB1-202ENST00000562542 M0R1X1 148 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 ITGB1BP1O14713 200 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
KATNB1-202ENST00000562542 OR2C1O95371 312 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 IGLV2-23P01705 113 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 FCGR1AP12314 374 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 ZBTB25P24278 435 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 OR52I1Q8NGK6 324 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 EXOSC1Q9Y3B2 195 aaKnown RBP13.69□□□□□ -0.22
KATNB1-202ENST00000562542 VPS13DQ5THJ4 4388 aa13.69□□□□□ -0.22
KATNB1-202ENST00000562542 A0A1W2PPK0 400 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 ZNF320A2RRD8 509 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 LGALS9O00182 355 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 UBE2CO00762 179 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 PROP1O75360 226 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 IFNA4P05014 189 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 CRYGBP07316 175 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 CBX3Q13185 183 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 TNXAQ16473 311 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 ZIK1Q3SY52 487 aaPredicted RBP13.68□□□□□ -0.22
KATNB1-202ENST00000562542 LINC00336Q6ZUF6 198 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 C6orf201Q7Z4U5 140 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 STPG3Q8N7X2 389 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 MLXQ9UH92 298 aa13.68□□□□□ -0.22
KATNB1-202ENST00000562542 SHOXO15266 292 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 MAP2K4P45985 399 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 ZNF45Q02386 682 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 C15orf32Q32M92 178 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 FAM209BQ5JX69 171 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 MOB1BQ7L9L4 216 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 UXS1Q8NBZ7 420 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 NECAP1Q8NC96 275 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 CCDC197Q8NCU1 140 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 OR1L6Q8NGR2 347 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 ACOT12Q8WYK0 555 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 RNF183Q96D59 192 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 SMIM19Q96E16 107 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 Q96MT0 163 aa13.67□□□□□ -0.22
KATNB1-202ENST00000562542 XRCC3O43542 346 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 OR2J3O76001 311 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 LIMS3P0CW19 117 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 LIMS4P0CW20 117 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 RBMS2Q15434 407 aaKnown RBP13.66□□□□□ -0.22
KATNB1-202ENST00000562542 Q499Y3 187 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 BTNL8Q6UX41 500 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 RBPMS2Q6ZRY4 209 aaKnown RBP13.66□□□□□ -0.22
KATNB1-202ENST00000562542 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
KATNB1-202ENST00000562542 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
KATNB1-202ENST00000562542 CENPNQ96H22 339 aaPredicted RBP13.66□□□□□ -0.22
KATNB1-202ENST00000562542 TRBV9A0A0B4J1U6 114 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 TRBV5-5A0A0J9YX44 114 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 TMEM213A2RRL7 107 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 NANOS2P60321 138 aaKnown RBP13.65□□□□□ -0.22
KATNB1-202ENST00000562542 OR2G6Q5TZ20 316 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 SLC38A6Q8IZM9 456 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 MFFQ9GZY8 342 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 UBQLN2Q9UHD9 624 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 ABCA13Q86UQ4 5058 aa13.65□□□□□ -0.22
KATNB1-202ENST00000562542 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 NAPSAO96009 420 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 CTRB1P17538 263 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
KATNB1-202ENST00000562542 HLA-DRB3P79483 266 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 ZNF880Q6PDB4 577 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 GPHB5Q86YW7 130 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 C2CD4CQ8TF44 421 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 PTX4Q96A99 478 aa13.64□□□□□ -0.23
KATNB1-202ENST00000562542 RPL36Q9Y3U8 105 aaKnown RBP13.64□□□□□ -0.23
KATNB1-202ENST00000562542 KIR2DL5BA0A0G2JN68 375 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms