RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TMEM108Q6UXF1 575 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 WDR86Q86TI4 376 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 WDYHV1Q96HA8 205 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 LIN7CQ9NUP9 197 aaKnown RBP9.26□□□□□ -0.93
NEIL1-202ENST00000561643 PSENENQ9NZ42 101 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 POLR3KQ9Y2Y1 108 aaPredicted RBP9.26□□□□□ -0.93
NEIL1-202ENST00000561643 UBE2NP61088 152 aaKnown RBP9.26□□□□□ -0.93
NEIL1-202ENST00000561643 ERVS71-1P61550 626 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 PPP1CBP62140 327 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 ARG2P78540 354 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF506Q5JVG8 444 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 ATP1A1-AS1Q5TC04 95 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 MYPOPQ86VE0 399 aaPredicted RBP9.26□□□□□ -0.93
NEIL1-202ENST00000561643 Q8IYB0 196 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF295-AS1Q8N0V1 137 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 LPAR2Q9HBW0 351 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 PARD6AQ9NPB6 346 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 GNG13Q9P2W3 67 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 SPRR3Q9UBC9 169 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 MED12LQ86YW9 2145 aa9.26□□□□□ -0.93
NEIL1-202ENST00000561643 KIAA1324LA8MWY0 1029 aaPredicted RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 NPIPB11E5RHQ5 1161 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 CD59P13987 128 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 RND2P52198 227 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 FAM180AQ6UWF9 173 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 DPPA3Q6W0C5 159 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF497Q6ZNH5 498 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 LSM10Q969L4 123 aaKnown RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 GP6Q9HCN6 339 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 MAP1BP46821 2468 aaKnown RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 TRBV24-1A0A075B6N3 115 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 TMEM210A6NLX4 147 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ZFP92A6NM28 416 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 IGLV2-14P01704 120 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 GRPP07492 148 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 CD33P20138 364 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ARHGAP21Q5T5U3 1957 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF705FA8MVS1 300 aaPredicted RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 IGKV1-5P01602 117 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF705DP0CH99 300 aaPredicted RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF705BP0CI00 300 aaPredicted RBP9.25□□□□□ -0.93
NEIL1-202ENST00000561643 CD82P27701 267 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 RNFT1Q5M7Z0 435 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 TMEM18Q96B42 140 aa9.25□□□□□ -0.93
NEIL1-202ENST00000561643 SH2D1BO14796 132 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 CRYABP02511 175 aaKnown RBP9.24□□□□□ -0.93
NEIL1-202ENST00000561643 PTTG1IPP53801 180 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 ALKBH6Q3KRA9 238 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF766Q5HY98 468 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 FAM90A2PQ658T7 463 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 ERASQ7Z444 233 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 FKBP11Q9NYL4 201 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 B4DEV8 164 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 LYZL6O75951 148 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 GNB2P62879 340 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 HBG1P69891 147 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 HBG2P69892 147 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 TGFBR3Q03167 851 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 TLE1Q04724 770 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 SPANXN5Q5MJ07 72 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 HES3Q5TGS1 186 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 TMPRSS7Q7RTY8 843 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 GCNT2Q8N0V5 402 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 SLC25A40Q8TBP6 338 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 SRD5A3Q9H8P0 318 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 MSL2Q9HCI7 577 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 TMEM9BQ9NQ34 198 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 RPRMQ9NS64 109 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
NEIL1-202ENST00000561643 OPN1MWP04001 364 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 OPN1MW2P0DN77 364 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 OPN1MW3P0DN78 364 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 CEBPDP49716 269 aaPredicted RBP9.23□□□□□ -0.93
NEIL1-202ENST00000561643 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 ARL16Q0P5N6 197 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF585BQ52M93 769 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF787Q6DD87 383 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 DRAM1Q8N682 238 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 FUT9Q9Y231 359 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 WNT2P09544 360 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 SP9P0CG40 484 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 BRS3P32247 399 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 PMP22Q01453 160 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 SP5Q6BEB4 398 aaPredicted RBP9.23□□□□□ -0.93
NEIL1-202ENST00000561643 ZNF525Q8N782 197 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 OBP2BQ9NPH6 170 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 KCNIP1Q9NZI2 227 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 KIAA2026Q5HYC2 2103 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 CEP250Q9BV73 2442 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 KIR2DL5BA0A0G2JN68 375 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 KIR2DL5BA0A0G2JPC4 375 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 A0A1B0GUS0 222 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 LOC102723971A0A1B0GUV8 181 aa9.23□□□□□ -0.93
NEIL1-202ENST00000561643 M0QZK8 103 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms