RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SERPINA7P05543 415 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 GLB1P16278 677 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 EDDM3BP56851 147 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 CARD18P57730 90 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 RAC1P63000 192 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 DRAM1Q8N682 238 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 STPG4Q8N801 248 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
TPM1-228ENST00000560975 C1QTNF5Q9BXJ0 243 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 PROK2Q9HC23 129 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 TUBG2Q9NRH3 451 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 DLL3Q9NYJ7 618 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 R4GN57 208 aa13.9□□□□□ -0.18
TPM1-228ENST00000560975 CACNA1DQ01668 2161 aa13.9□□□□□ -0.19
TPM1-228ENST00000560975 C5orf49A4QMS7 147 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 CD99P14209 185 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 COMPP49747 757 aaPredicted RBP13.89□□□□□ -0.19
TPM1-228ENST00000560975 YPEL3P61236 119 aaPredicted RBP13.89□□□□□ -0.19
TPM1-228ENST00000560975 PCBD1P61457 104 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 FBXW9Q5XUX1 488 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 SPSB4Q96A44 273 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 AQP7O14520 342 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 PDE6DO43924 150 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 CEACAM21Q3KPI0 293 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 ZNF808Q8N4W9 903 aaPredicted RBP13.89□□□□□ -0.19
TPM1-228ENST00000560975 OR10G8Q8NGN5 311 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 FCN1O00602 326 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 SH2D1BO14796 132 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 TMPRSS2O15393 492 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 SPINK4O60575 86 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 IER3P46695 156 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 OCC1Q8TAD7 63 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 TRAPPC2LQ9UL33 140 aa13.89□□□□□ -0.19
TPM1-228ENST00000560975 FRYLO94915 3013 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 DIRC3C9JPN6 131 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 HLA-DRB5Q30154 266 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 SPATA45Q537H7 98 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 FAM53AQ6NSI3 398 aaPredicted RBP13.88□□□□□ -0.19
TPM1-228ENST00000560975 WDR74Q6RFH5 385 aaPredicted RBP13.88□□□□□ -0.19
TPM1-228ENST00000560975 SLC25A45Q8N413 288 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 SIGLECL1Q8N7X8 197 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 OR1L6Q8NGR2 347 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 C19orf25Q9UFG5 118 aaPredicted RBP13.88□□□□□ -0.19
TPM1-228ENST00000560975 WIPI2Q9Y4P8 454 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 SCO2A0A1W2PP80 73 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 C20orf202A1L168 122 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 ZNF716A6NP11 495 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 NDUFB8O95169 186 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 NGFP01138 241 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 PTTG1IPP53801 180 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 NXPH1P58417 271 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 RAC3P60763 192 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 SELENOTP62341 195 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 ATP6V1FQ16864 119 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 KRTCAP3Q53RY4 240 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 KMT5CQ86Y97 462 aa13.88□□□□□ -0.19
TPM1-228ENST00000560975 FRYQ5TBA9 3013 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 IGHV3-64DA0A0J9YX35 117 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 A0A1W2PPV4 95 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 ODAMA1E959 279 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 PMS2P5A8MQ11 134 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 DEGS1O15121 323 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 GDF9O60383 454 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 RHBDL1O75783 438 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 SYNGR4O95473 234 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 SAXO1Q8IYX7 474 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 ABHD3Q8WU67 409 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 APOBEC3DQ96AK3 386 aaPredicted RBP13.87□□□□□ -0.19
TPM1-228ENST00000560975 TXN2Q99757 166 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 SF3B5Q9BWJ5 86 aaKnown RBP13.87□□□□□ -0.19
TPM1-228ENST00000560975 HSPB7Q9UBY9 170 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 DOCK7Q96N67 2140 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 LRP5LA4QPB2 252 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 OR5G3P0C626 314 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 TIMP3P35625 211 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 TGFBR3Q03167 851 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 FAM58AQ8N1B3 248 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 ARL6IP6Q8N6S5 226 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
TPM1-228ENST00000560975 SNURFLB1AK76 121 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.86□□□□□ -0.19
TPM1-228ENST00000560975 CCL25O15444 150 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 COL8A2P25067 703 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 SUMO1P63165 101 aaKnown RBP13.86□□□□□ -0.19
TPM1-228ENST00000560975 Q6ZN92 141 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 LRFN3Q9BTN0 628 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 PCED1AQ9H1Q7 454 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 RARRES3Q9UL19 164 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 KIAA1549Q9HCM3 1950 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 A0A0G2JMM0 328 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 A0A1W2PPB8 328 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 A0A1W2PRS3 328 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 LNP1A1A4G5 178 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 KIR3DP1A8MWS1 328 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 FAM90A26D6RGX4 464 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 IGHEP01854 428 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 PMCHP20382 165 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 RPP30P78346 268 aaKnown RBP13.86□□□□□ -0.19
TPM1-228ENST00000560975 KIAA1644Q3SXP7 199 aa13.86□□□□□ -0.19
TPM1-228ENST00000560975 KCNIP2Q9NS61 270 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms