RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CHST1O43916 411 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 HPRT1P00492 218 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 KRASP01116 189 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 G6PCP35575 357 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 THBS3P49746 956 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 LINC00205P59089 165 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 VAMP2P63027 116 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 RPL7L1Q6DKI1 246 aaKnown RBP10.59□□□□□ -0.71
SNX1-211ENST00000560829 TMEM252Q8N6L7 170 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 UBAC2Q8NBM4 344 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 ZNF596Q8TC21 504 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
SNX1-211ENST00000560829 ADTRPQ96IZ2 230 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 SLC25A31Q9H0C2 315 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 PRELID3BQ9Y3B1 194 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 WSB1Q9Y6I7 421 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 A0A087X0M5 115 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 A0A1B0GX30 115 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 A6NNC1 897 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 SYNGR2O43760 224 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 RRASP10301 218 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 ARHGDIBP52566 201 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 PDZD9Q8IXQ8 264 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 LYG1Q8N1E2 194 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 LINC00311Q8N616 119 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 BSCL2Q96G97 398 aaPredicted RBP10.59□□□□□ -0.71
SNX1-211ENST00000560829 S1PR3Q99500 378 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 ARV1Q9H2C2 271 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 HSPB7Q9UBY9 170 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 RALYQ9UKM9 306 aaKnown RBP10.59□□□□□ -0.71
SNX1-211ENST00000560829 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 HIVEP3Q5T1R4 2406 aa10.59□□□□□ -0.71
SNX1-211ENST00000560829 CFAP46Q8IYW2 2715 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 MARCH11A6NNE9 402 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 LEUTXA8MZ59 168 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 FCGR3BO75015 233 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 GNG10P50151 68 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 CAV2P51636 162 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 TAS2R30P59541 319 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 NHLH2Q02577 135 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 BAXQ07812 192 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 AARDQ4LEZ3 155 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 RAB1CQ92928 201 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
SNX1-211ENST00000560829 MIOXQ9UGB7 285 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 IGSF10Q6WRI0 2623 aa10.58□□□□□ -0.72
SNX1-211ENST00000560829 ERVFRD-1P60508 538 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
SNX1-211ENST00000560829 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 EIF5AL1Q6IS14 154 aaKnown RBP10.57□□□□□ -0.72
SNX1-211ENST00000560829 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 OR4S2Q8NH73 311 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 C8orf46Q8TAG6 207 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 R3HDM4Q96D70 268 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 CHODLQ9H9P2 273 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 DIDO1Q9BTC0 2240 aaKnown RBP10.57□□□□□ -0.72
SNX1-211ENST00000560829 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 FGF16O43320 207 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 NXPH3O95157 252 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 AVPI1Q5T686 147 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 ZNF833PQ6ZTB9 187 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 H2BFWTQ7Z2G1 175 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 ZNF383Q8NA42 475 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 NEIL1Q96FI4 390 aaPredicted RBP10.57□□□□□ -0.72
SNX1-211ENST00000560829 SMIM8Q96KF7 97 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 BBC3Q96PG8 261 aaPredicted RBP10.57□□□□□ -0.72
SNX1-211ENST00000560829 SMIM3Q9BZL3 60 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 WFDC1Q9HC57 220 aa10.57□□□□□ -0.72
SNX1-211ENST00000560829 BORCS7-ASMTA0A0B4J1R7 106 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 TXNL1O43396 289 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 LY6HO94772 140 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 RBP4P02753 201 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 IGHV1-8P0DP01 117 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 NQO2P16083 231 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 UBE2KP61086 200 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 CLEC9AQ6UXN8 241 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 COMMD7Q86VX2 200 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 OR8B3Q8NGG8 313 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 TMED6Q8WW62 240 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 CXorf58Q96LI9 332 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
SNX1-211ENST00000560829 BARX1Q9HBU1 254 aaPredicted RBP10.56□□□□□ -0.72
SNX1-211ENST00000560829 A0A1W2PPH5 198 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 ANKRD34BA5PLL1 514 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 PPIHO43447 177 aaKnown RBP10.55□□□□□ -0.72
SNX1-211ENST00000560829 MED6O75586 246 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 FAM157CP0CG43 387 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms