RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CTXN2P0C2S0 81 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 PF4V1P10720 104 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 CD33P20138 364 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 CEACAM3P40198 252 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 NPBWR2P48146 333 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 NKX2-5P52952 324 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-214ENST00000560402 LOXL3P58215 753 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 SIGIRRQ6IA17 410 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 UXS1Q8NBZ7 420 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 CORO2AQ92828 525 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 IFT22Q9H7X7 185 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 AURKAIP1Q9NWT8 199 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-214ENST00000560402 RCC2Q9P258 522 aaKnown RBP10.85□□□□□ -0.67
SMAD3-214ENST00000560402 KIAA2026Q5HYC2 2103 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 LEUTXA8MZ59 168 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OOSP1A8MZH6 123 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 M0QZK8 103 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 SIRPB1O00241 398 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 DEGS1O15121 323 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 FABP7O15540 132 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 SLC22A5O76082 557 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OR2F2O95006 317 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OR2H2O95918 312 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 IGLV1-47P01700 117 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OR5H8P0DN80 308 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 VAMP1P23763 118 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 LMO1P25800 156 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 DUSP1P28562 367 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 HERV-K104P61576 105 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 BLCAPP62952 87 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 DHRS2Q13268 280 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 TMEM128Q5BJH2 165 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 CCDC144NLQ6NUI1 221 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 Q6ZS49 121 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 MOB1BQ7L9L4 216 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OVCH2Q7RTZ1 564 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 ABHD12Q8N2K0 398 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 WFDC9Q8NEX5 89 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OR5AU1Q8NGC0 362 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OR4X2Q8NGF9 303 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 OR2T35Q8NGX2 323 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 COQ8AQ8NI60 647 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 MARCH1Q8TCQ1 289 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 ZNF230Q9UIE0 474 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-214ENST00000560402 VSIG4Q9Y279 399 aa10.84□□□□□ -0.67
SMAD3-214ENST00000560402 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-214ENST00000560402 GOSR2O14653 212 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 DUS4LO95620 317 aaKnown RBP10.83□□□□□ -0.68
SMAD3-214ENST00000560402 DIRAS3O95661 229 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 PF4P02776 101 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 ZNF44P15621 663 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 AKR1C4P17516 323 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 CXCL3P19876 107 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 FGL1Q08830 312 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 HLA-DRB5Q30154 266 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 PRAMEF5Q5TYX0 476 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 Q6ZS46 218 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 LHFPL1Q86WI0 220 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 OR52B4Q8NGK2 314 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 RBM14Q96PK6 669 aaKnown RBP10.83□□□□□ -0.68
SMAD3-214ENST00000560402 ZNF2Q9BSG1 426 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-214ENST00000560402 SLC25A33Q9BSK2 321 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 SLA2Q9H6Q3 261 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 COMMD9Q9P000 198 aa10.83□□□□□ -0.68
SMAD3-214ENST00000560402 A0A087X0M5 115 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 A0A0B4J2A0 478 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 A0A1B0GX30 115 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 ODAMA1E959 279 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 C9orf170A2RU37 121 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 SDCBPO00560 298 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 MMP23AO75900 390 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 S100GP29377 79 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 ABCA11PQ4W5N1 156 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 PAN3Q58A45 887 aaKnown RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 CENPVQ7Z7K6 275 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 CCDC71LQ8N9Z2 235 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 MAFIPQ8WZ33 124 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 HDHD3Q9BSH5 251 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 PDCD10Q9BUL8 212 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 DPCDQ9BVM2 203 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 GON7Q9BXV9 100 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 GPR61Q9BZJ8 451 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 OR6C3Q9NZP0 311 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 GPR132Q9UNW8 380 aa10.82□□□□□ -0.68
SMAD3-214ENST00000560402 AMMECR1Q9Y4X0 333 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-214ENST00000560402 TRBV6-6A0A0A6YYG2 114 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 PIGBOS1A0A0B4J2F0 54 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 A0A1W2PRX2 142 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 TCRBV4S1A1TA0A5B7 111 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 TOR1AO14656 332 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 OR2A4O95047 310 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 CTSDP07339 412 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-214ENST00000560402 ZBTB25P24278 435 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 KCNJ3P48549 501 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 PRRX1P54821 245 aa10.81□□□□□ -0.68
SMAD3-214ENST00000560402 CYCSP99999 105 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms