RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 AGMATQ9BSE5 352 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 RTBDNQ9BSG5 229 aaPredicted RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 MRPL20Q9BYC9 149 aaKnown RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 DPAGT1Q9H3H5 408 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 NCOR1P1Q9H4R4 102 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 C5orf66Q9H5L9 145 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 METTL8Q9H825 291 aaKnown RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 LINC00574Q9H8X3 128 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 PALMDQ9NP74 551 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 SLC2A8Q9NY64 477 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 LPAR3Q9UBY5 353 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 ZNF107Q9UII5 783 aaPredicted RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 ZNF221Q9UK13 617 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 MGAT4AQ9UM21 535 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 OR2W1Q9Y3N9 320 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 HILPDAQ9Y5L2 63 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 AUP1Q9Y679 476 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 CSPG4Q6UVK1 2322 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 ABCA1O95477 2261 aa4.21□□□□□ -1.73
SPG11-220ENST00000559933 SONP18583 2426 aaKnown RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 A0A0U1RQK1 487 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 CENPVL3A0A0U1RRI6 287 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 NAP1L6A6NFF2 107 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 CENPXA8MT69 81 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 ODF3BA8MYP8 253 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 J3QR06 171 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 M0R1X1 148 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 YPEL1O60688 119 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 PEX14O75381 377 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 DIRAS3O95661 229 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 PTTG1O95997 202 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 RPA2P15927 270 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 PRTN3P24158 256 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 CD24P25063 80 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SAA4P35542 130 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 GPR12P47775 334 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 PIGPP57054 158 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SUPT4H1P63272 117 aaKnown RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 PPP1R1AQ13522 171 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 EIF4EBP1Q13541 118 aaPredicted RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 RBMS2Q15434 407 aaKnown RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 TRIM16LQ309B1 348 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SP6Q3SY56 376 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 CYB5R2Q6BCY4 276 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 DHRS11Q6UWP2 260 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SLC25A48Q6ZT89 311 aaKnown RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 TBC1D26Q86UD7 250 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 BCL6BQ8N143 479 aaPredicted RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 DRAM1Q8N682 238 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 ZNF645Q8N7E2 425 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 ZNF383Q8NA42 475 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 OR10X1Q8NGY0 326 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 OR6F1Q8NGZ6 308 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 CASTOR1Q8WTX7 329 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 CHPT1Q8WUD6 406 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 YPEL2Q96QA6 119 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 TP53RKQ96S44 253 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 PRRT1Q99946 306 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 ZNF251Q9BRH9 671 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 C7orf50Q9BRJ6 194 aaKnown RBP4.21□□□□□ -1.74
SPG11-220ENST00000559933 CLEC7AQ9BXN2 247 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 TOLLIPQ9H0E2 274 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SLC2A9Q9NRM0 540 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SDHAF2Q9NX18 166 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 SCP2D1Q9UJQ7 156 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 GPR132Q9UNW8 380 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 KPTNQ9Y664 436 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 HIVEP1P15822 2718 aa4.21□□□□□ -1.74
SPG11-220ENST00000559933 A0A087X0M5 115 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 IGHV1-69DA0A0B4J2H0 117 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 A0A1B0GX30 115 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 A0A1W2PPH5 198 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 A0A1W2PPI3 338 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 INMT-MINDY4F8WBC2 141 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 LY6LH3BQJ8 138 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 BUB1B-PAK6H3BSN5 160 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 GPR31O00270 319 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CCSO14618 274 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 TOR1AO14656 332 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 NPFFO15130 113 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 RAMP3O60896 148 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 PGLYRP1O75594 196 aaPredicted RBP4.2□□□□□ -1.74
SPG11-220ENST00000559933 RGS11O94810 467 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 LY6G6DO95868 133 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 IGLV1-47P01700 117 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 IGHV1-69P01742 117 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 RBP4P02753 201 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CTSDP07339 412 aaPredicted RBP4.2□□□□□ -1.74
SPG11-220ENST00000559933 CTXN2P0C2S0 81 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 OR5AC1P0C628 307 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CT45A6P0DMU7 189 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CT45A5P0DMU8 189 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CT45A7P0DMV0 189 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CNTFRP26992 372 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 CD34P28906 385 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 GZMKP49863 264 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 RAB13P51153 203 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 BRWD1-AS2P59051 145 aa4.2□□□□□ -1.74
SPG11-220ENST00000559933 ZNF816Q0VGE8 651 aaPredicted RBP4.2□□□□□ -1.74
SPG11-220ENST00000559933 SSX2Q16385 188 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms