RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ZNF788Q6ZQV5 615 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 Q6ZRM9 215 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 PARP11Q9NR21 331 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 USF3Q68DE3 2245 aa14.71□□□□□ -0.05
SNX1-208ENST00000559844 ITGB1BP1O14713 200 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 SYNGR2O43760 224 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 NXPH3O95157 252 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 CGB3P0DN86 165 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 CGB7P0DN87 165 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 SPP1P10451 314 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 GPR12P47775 334 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 PAX9P55771 341 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 CCL8P80075 99 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 LTC4SQ16873 150 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 C11orf71Q6IPW1 123 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 C1orf87Q8N0U7 546 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 SPAG16Q8N0X2 631 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 CD300LFQ8TDQ1 290 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 AGMATQ9BSE5 352 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 WSB1Q9Y6I7 421 aa14.71□□□□□ -0.06
SNX1-208ENST00000559844 UNC79Q9P2D8 2635 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 TRGV10A0A0A0MS01 117 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 TOR1AO14656 332 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 TMEM50AO95807 157 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 RAB5CP51148 216 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 TMEM30BQ3MIR4 351 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 Q3ZCU0 254 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 PXDC1Q5TGL8 231 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 STX12Q86Y82 276 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 ZCCHC24Q8N2G6 241 aaKnown RBP14.7□□□□□ -0.06
SNX1-208ENST00000559844 CCL19Q99731 98 aa14.7□□□□□ -0.06
SNX1-208ENST00000559844 APCP25054 2843 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 TRAV38-1A0A0B4J264 116 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 SIGLEC5O15389 551 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 CRYZL1O95825 349 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 GYPAP02724 150 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 RAB7AP51149 207 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 LOXL3P58215 753 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 TAS2R30P59541 319 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 PJVKQ0ZLH3 352 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 TUSC1Q2TAM9 212 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 BTNL3Q6UXE8 466 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 DEFB108BQ8NET1 73 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 SAP30LQ9HAJ7 183 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 KBTBD11-OT1A0A1B0GTJ5 212 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 ZNF816Q0VGE8 651 aaPredicted RBP14.69□□□□□ -0.06
SNX1-208ENST00000559844 IZUMO4Q1ZYL8 232 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 CCL13Q99616 98 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 MS4A5Q9H3V2 200 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 CLN8Q9UBY8 286 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 GAB2Q9UQC2 676 aa14.69□□□□□ -0.06
SNX1-208ENST00000559844 STRAPQ9Y3F4 350 aaKnown RBP14.69□□□□□ -0.06
SNX1-208ENST00000559844 MEX3AA1L020 520 aaKnown RBP14.68□□□□□ -0.06
SNX1-208ENST00000559844 C17orf98A8MV24 154 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 TXNL1O43396 289 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 RAMP3O60896 148 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 DFFBO76075 338 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 OMGP23515 440 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 CDKN1AP38936 164 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 PPOXP50336 477 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 F2RL1P55085 397 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 CLINT1Q14677 625 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 C17orf58Q2M2W7 97 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 ODF3L1Q8IXM7 274 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 BPIFCQ8NFQ6 507 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 OR5C1Q8NGR4 320 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 HRH4Q9H3N8 390 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 POLQO75417 2590 aa14.68□□□□□ -0.06
SNX1-208ENST00000559844 ZNF729A6NN14 1252 aaPredicted RBP14.67□□□□□ -0.06
SNX1-208ENST00000559844 RAB29O14966 203 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 S1PR2O95136 353 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 P0C879 139 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 SELLP14151 372 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 SULT1A1P50225 295 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 DYNLT3P51808 116 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 OR2B11Q5JQS5 317 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 Q6ZRG5 221 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 CORO2AQ92828 525 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 NARFLQ9H6Q4 476 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 PSENENQ9NZ42 101 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 PLA2G2EQ9NZK7 142 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 CST7O76096 145 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 G6PCP35575 357 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 BTNL8Q6UX41 500 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 FAM216BQ8N7L0 139 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 HSD17B11Q8NBQ5 300 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 ATP5SQ99766 215 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.67□□□□□ -0.06
SNX1-208ENST00000559844 GFOD1Q9NXC2 390 aa14.67□□□□□ -0.06
SNX1-208ENST00000559844 ANKRD17O75179 2603 aaKnown RBP14.67□□□□□ -0.06
SNX1-208ENST00000559844 KIAA2026Q5HYC2 2103 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 PPIAL4EA0A075B759 164 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 PPIAL4DF5H284 164 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 KRASP01116 189 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 PPIAL4FP0DN26 164 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 DUTP33316 252 aaKnown RBP14.66□□□□□ -0.06
SNX1-208ENST00000559844 BRWD1-AS2P59051 145 aa14.66□□□□□ -0.06
SNX1-208ENST00000559844 DUX4L9Q6RFH8 374 aaPredicted RBP14.66□□□□□ -0.06
SNX1-208ENST00000559844 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.66□□□□□ -0.06
SNX1-208ENST00000559844 IGFBPL1Q8WX77 278 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms