RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 IGLV1-44P01699 117 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 S100A8P05109 93 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 S100A9P06702 114 aaKnown RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 OR9G9P0C7N8 305 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 SMIM6P0DI80 62 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 PRDX2P32119 198 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF83P51522 516 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 NDUFA6P56556 154 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 UTF1Q5T230 341 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 NCR3LG1Q68D85 454 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 IGFL2Q6UWQ7 119 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 SSX9Q7RTT3 188 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 C1orf162Q8NEQ5 155 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 QTRT1Q9BXR0 403 aaKnown RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 NIT2Q9NQR4 276 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF71Q9NQZ8 489 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 IGKV1D-17A0A075B6S4 117 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 RAB29O14966 203 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 PROP1O75360 226 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 CLDN14O95500 239 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 MDKP21741 143 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-216ENST00000559819 CD82P27701 267 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 CD81P60033 236 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 RPRMLQ8N4K4 120 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 TMEM147Q9BVK8 224 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 PARD6GQ9BYG4 376 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-216ENST00000559819 TOLLIPQ9H0E2 274 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 PLSCR4Q9NRQ2 329 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 CGAP01215 116 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 TRGC2P03986 189 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 FFAR4Q5NUL3 377 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 VHLLQ6RSH7 139 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 MRGPRGQ86SM5 289 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 VKORC1L1Q8N0U8 176 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 PINX1Q96BK5 328 aaKnown RBP8.36□□□□□ -1.07
LRRC28-216ENST00000559819 LURAP1Q96LR2 239 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 SDF2L1Q9HCN8 221 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 SIRT7Q9NRC8 400 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
LRRC28-216ENST00000559819 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 MARCH11A6NNE9 402 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 LAMA5O15230 3695 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 EIF2S3P41091 472 aaKnown RBP8.35□□□□□ -1.07
LRRC28-216ENST00000559819 RPL39P5Q59GN2 51 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 FAM201AQ5SY85 155 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 MBNL2Q5VZF2 373 aaKnown RBP8.35□□□□□ -1.07
LRRC28-216ENST00000559819 OR10G9Q8NGN4 311 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 OR10G7Q8NGN6 311 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 Q8TCH9 128 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 R3HDM4Q96D70 268 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 DOK5Q9P104 306 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 DOCK11Q5JSL3 2073 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 IFNL4K9M1U5 179 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 M0R1B8 84 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 SPINT2O43291 252 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 FCGR3BO75015 233 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 SELLP14151 372 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 GPR12P47775 334 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 CTAG1AP78358 180 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 WDR25Q64LD2 544 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-216ENST00000559819 ZNRF1Q8ND25 227 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 OR10P1Q8NGE3 313 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 LEAP2Q969E1 77 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
LRRC28-216ENST00000559819 GNG12Q9UBI6 72 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 SLC25A15Q9Y619 301 aa8.35□□□□□ -1.07
LRRC28-216ENST00000559819 EP300Q09472 2414 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-216ENST00000559819 CACNA1HO95180 2353 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 CXorf65A6NEN9 183 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 LINC00587B1AMM8 73 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 IFNA1P01562 189 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 BMP5P22003 454 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 DUTP33316 252 aaKnown RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 ADIRFQ15847 76 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF66Q6ZN08 573 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 GCSAMQ8N6F7 178 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 P2RX4Q99571 388 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 NPCDR1Q9BY65 106 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 SVILO95425 2214 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.07
LRRC28-216ENST00000559819 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
LRRC28-216ENST00000559819 C15orf62A8K5M9 175 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms