RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CKLFQ9UBR5 152 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 GLS2Q9UI32 602 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 ING4Q9UNL4 249 aa4.53□□□□□ -1.68
USP3-215ENST00000559771 RBMX2Q9Y388 322 aaKnown RBP4.53□□□□□ -1.68
USP3-215ENST00000559771 IGHV3-72A0A0B4J1Y9 119 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 IGHV1-3A0A0C4DH29 117 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SERPINE3A8MV23 424 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 H3BUI4 141 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 CCL24O00175 119 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SULT1C2O00338 296 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 HSD17B6O14756 317 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SLC31A2O15432 143 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 XRCC3O43542 346 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SCGNO76038 276 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 TCRBP04435 133 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 TMEM225BP0DP42 221 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 C4BPBP20851 252 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 GPR12P47775 334 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 REG1BP48304 166 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 RAB7AP51149 207 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 MECP2P51608 486 aaKnown RBP4.52□□□□□ -1.69
USP3-215ENST00000559771 ARHGDIBP52566 201 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 ZNF134P52741 427 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 F2RL1P55085 397 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 DGCR2P98153 550 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 MADCAM1Q13477 382 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 FHL3Q13643 280 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 KLF9Q13886 244 aaPredicted RBP4.52□□□□□ -1.69
USP3-215ENST00000559771 IL13RA2Q14627 380 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 LTC4SQ16873 150 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 PAN3Q58A45 887 aaKnown RBP4.52□□□□□ -1.69
USP3-215ENST00000559771 FAM27D1Q5T7N8 215 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 ASPHD1Q5U4P2 390 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 GLT8D1Q68CQ7 371 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SLC35E3Q7Z769 313 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 LRRTM1Q86UE6 522 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 TGIF2LXQ8IUE1 241 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 CDH26Q8IXH8 852 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 IZUMO1Q8IYV9 350 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 OR8H3Q8N146 312 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 NKAIN3Q8N8D7 197 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 ZNF565Q8N9K5 539 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SUMF2Q8NBJ7 301 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 ZNF439Q8NDP4 499 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 OR51D1Q8NGF3 324 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 UBALD1Q8TB05 177 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 ZFAND1Q8TCF1 268 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 MYOZ3Q8TDC0 251 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 HSPB9Q9BQS6 159 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
USP3-215ENST00000559771 MED28Q9H204 178 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 IFT22Q9H7X7 185 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 SCPEP1Q9HB40 452 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 PCDHB16Q9NRJ7 776 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 STEAP1Q9UHE8 339 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 AK6Q9Y3D8 172 aaKnown RBP4.52□□□□□ -1.69
USP3-215ENST00000559771 ALG5Q9Y673 324 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 U3KQK5 164 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
USP3-215ENST00000559771 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 A0A0B4J293 547 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 LINC00854A0A1B0GVQ3 168 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 A0A1W2PP11 408 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 SMIM30A4D0T7 59 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 SNRPGP15A8MWD9 76 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 NUDT19A8MXV4 375 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 SLC17A2O00624 439 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 IGHG4P01861 327 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 IL5P05113 134 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 HCKP08631 526 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 ANXA3P12429 323 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 CDX1P47902 265 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 HES1Q14469 280 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 KIR2DS1Q14954 304 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 NHLRC3Q5JS37 347 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 TMEM69Q5SWH9 247 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 RAB12Q6IQ22 244 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 TEX38Q6PEX7 206 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 C5orf24Q7Z6I8 188 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 SERPINA12Q8IW75 414 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 FAM71E2Q8N5Q1 922 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 LINC00311Q8N616 119 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 COMMD1Q8N668 190 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 C8orf31Q8N9H6 132 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 OR10A7Q8NGE5 316 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 OR5D14Q8NGL3 314 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 OR5H6Q8NGV6 325 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 LGALS14Q8TCE9 139 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 TNFAIP8L1Q8WVP5 186 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 RTN4IP1Q8WWV3 396 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 TMEM106AQ96A25 262 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 ORAI1Q96D31 301 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 RITA1Q96K30 269 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 ASCL2Q99929 193 aa4.51□□□□□ -1.69
USP3-215ENST00000559771 DPCDQ9BVM2 203 aaPredicted RBP4.51□□□□□ -1.69
USP3-215ENST00000559771 GPR61Q9BZJ8 451 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms