RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 WASHC3Q9Y3C0 194 aa16.11■□□□□ 0.17
TSPAN3-207ENST00000559494 H7C2Y5 167 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 CTDSPLO15194 276 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 SLC22A5O76082 557 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 DUTP33316 252 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 CNPY1Q3B7I2 92 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 TMEM95Q3KNT9 176 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 C9orf152Q5JTZ5 239 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 OR8H1Q8NGG4 311 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 WFDC12Q8WWY7 111 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 CCL28Q9NRJ3 127 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 RABL2AQ9UBK7 228 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 RABL2BQ9UNT1 228 aa16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 RBMX2Q9Y388 322 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-207ENST00000559494 FABP12A6NFH5 140 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 LINC00473A8K010 186 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 THBS3P49746 956 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 FXYD4P59646 89 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 MRPS10P82664 201 aaKnown RBP16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 FAM71E2Q8N5Q1 922 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 SECTM1Q8WVN6 248 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 DDB2Q92466 427 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 ZNF2Q9BSG1 426 aaPredicted RBP16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 SLC35D1Q9NTN3 355 aa16.09■□□□□ 0.17
TSPAN3-207ENST00000559494 IGKV1-16P04430 117 aa16.08■□□□□ 0.16
TSPAN3-207ENST00000559494 EIF4EBP1Q13541 118 aaPredicted RBP16.08■□□□□ 0.16
TSPAN3-207ENST00000559494 MMDQ15546 238 aa16.08■□□□□ 0.16
TSPAN3-207ENST00000559494 NPBQ8NG41 125 aa16.08■□□□□ 0.16
TSPAN3-207ENST00000559494 SMIM4Q8WVI0 70 aa16.08■□□□□ 0.16
TSPAN3-207ENST00000559494 SLC5A7Q9GZV3 580 aa16.08■□□□□ 0.16
TSPAN3-207ENST00000559494 LINC01548A6NM66 108 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 M0QYG6 137 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 APOA2P02652 100 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 CD3DP04234 171 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 VDAC2P45880 294 aaPredicted RBP16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 RPL30P62888 115 aaKnown RBP16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 ARSJQ5FYB0 599 aaPredicted RBP16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 PDPNQ86YL7 162 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 BVESQ8NE79 360 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 OR6Q1Q8NGQ2 317 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 OR6F1Q8NGZ6 308 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 ADTRPQ96IZ2 230 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 RNF5Q99942 180 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 RASL11BQ9BPW5 248 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 WNT10AQ9GZT5 417 aa16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 LIN7CQ9NUP9 197 aaKnown RBP16.07■□□□□ 0.16
TSPAN3-207ENST00000559494 NBR2O15453 112 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 GSTZ1O43708 216 aaPredicted RBP16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 NDUFA3O95167 84 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 VSIG10L2P0DP72 767 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 S100A5P33763 92 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 HERV-K104P61576 105 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 TSPAN5P62079 268 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 SSBP1Q04837 148 aaKnown RBP16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 MSMO1Q15800 293 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 VAX1Q5SQQ9 334 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 CCDC190Q86UF4 302 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 KLHDC1Q8N7A1 406 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 TMEM229BQ8NBD8 167 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 MOB3AQ96BX8 217 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 GPHA2Q96T91 129 aa16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 TINAGL1Q9GZM7 467 aaPredicted RBP16.06■□□□□ 0.16
TSPAN3-207ENST00000559494 PEX14O75381 377 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 IGHG2P01859 326 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 GNRHRP30968 328 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 RPS16P62249 146 aaKnown RBP16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 TAGLNQ01995 201 aaKnown RBP16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 C5orf64Q2M2E5 130 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 ACTBL2Q562R1 376 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 SHISA2Q6UWI4 295 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 TMEM17Q86X19 198 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 MFSD4AQ8N468 514 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 WIPF2Q8TF74 440 aaPredicted RBP16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 FLYWCH2Q96CP2 140 aaKnown RBP16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 V9GYH0 126 aa16.05■□□□□ 0.16
TSPAN3-207ENST00000559494 CD74P04233 296 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 ZNF818PQ6ZRF7 136 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 ZBTB34Q8NCN2 500 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 HSD17B10Q99714 261 aaKnown RBP16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 CITED1Q99966 193 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 FXYD6Q9H0Q3 95 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 FBXL15Q9H469 300 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 TAS2R8Q9NYW2 309 aa16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 ZNF107Q9UII5 783 aaPredicted RBP16.04■□□□□ 0.16
TSPAN3-207ENST00000559494 RRHO14718 337 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 TNFSF12O43508 249 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 RRASP10301 218 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 TBPP20226 339 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 BRWD1-AS2P59051 145 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 TAS2R19P59542 299 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 PSG5Q15238 335 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 TMEM177Q53S58 311 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 RNASE10Q5GAN6 216 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 ZNF66Q6ZN08 573 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 SLC35E3Q7Z769 313 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 HSPB9Q9BQS6 159 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 KIAA1456Q9P272 454 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 TNCP24821 2201 aa16.03■□□□□ 0.16
TSPAN3-207ENST00000559494 SRRM4A7MD48 611 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms