RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 GINS4Q9BRT9 223 aa8.56□□□□□ -1.04
SPG11-216ENST00000559347 VCX3AQ9NNX9 186 aa8.56□□□□□ -1.04
SPG11-216ENST00000559347 COL7A1Q02388 2944 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 TRAV41A0A0B4J266 112 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 TRIM64CA6NLI5 447 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 SSX5O60225 188 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 DUS4LO95620 317 aaKnown RBP8.55□□□□□ -1.04
SPG11-216ENST00000559347 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 MYCNOSP40205 109 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 CDX1P47902 265 aaPredicted RBP8.55□□□□□ -1.04
SPG11-216ENST00000559347 GNG2P59768 71 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 PITPNAQ00169 270 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 PLGLAQ15195 96 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 PSG5Q15238 335 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 ECSCRQ19T08 205 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 DEFB136Q30KP8 78 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 FOXB2Q5VYV0 432 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 REC114Q7Z4M0 266 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 RAX2Q96IS3 184 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 DCSTAMPQ9H295 470 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 TPSG1Q9NRR2 321 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 SLC35D1Q9NTN3 355 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 NECAP2Q9NVZ3 263 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 AURKAIP1Q9NWT8 199 aaPredicted RBP8.55□□□□□ -1.04
SPG11-216ENST00000559347 GAB2Q9UQC2 676 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 WSB1Q9Y6I7 421 aa8.55□□□□□ -1.04
SPG11-216ENST00000559347 A0A0A6YYH2 397 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 A6NJ64 397 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 FCN1O00602 326 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 AIREO43918 545 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 TMEM127O75204 238 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 CA2P00918 260 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 CX3CL1P78423 397 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 ZNF660Q6AZW8 331 aaPredicted RBP8.54□□□□□ -1.04
SPG11-216ENST00000559347 MINDY2Q8NBR6 621 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 C4orf3Q8WVX3 66 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 HARBI1Q96MB7 349 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 TSNAXQ99598 290 aaKnown RBP8.54□□□□□ -1.04
SPG11-216ENST00000559347 ST6GALNAC5Q9BVH7 336 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 METTL1Q9UBP6 276 aaKnown RBP8.54□□□□□ -1.04
SPG11-216ENST00000559347 SPATA2Q9UM82 520 aa8.54□□□□□ -1.04
SPG11-216ENST00000559347 RBM7Q9Y580 266 aaKnown RBP8.54□□□□□ -1.04
SPG11-216ENST00000559347 A0A1W2PN81 502 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 LINC00473A8K010 186 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 CCL24O00175 119 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 SLC25A17O43808 307 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 SOX15O60248 233 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 IGLV2-23P01705 113 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 CTXN2P0C2S0 81 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 NFYAP23511 347 aaPredicted RBP8.53□□□□□ -1.04
SPG11-216ENST00000559347 CHRNA7P36544 502 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 RPS16P62249 146 aaKnown RBP8.53□□□□□ -1.04
SPG11-216ENST00000559347 LSM3P62310 102 aaKnown RBP8.53□□□□□ -1.04
SPG11-216ENST00000559347 SSBP2P81877 361 aaPredicted RBP8.53□□□□□ -1.04
SPG11-216ENST00000559347 FHL3Q13643 280 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 CNIH2Q6PI25 160 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 CROCCP3Q8IVE0 287 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 ZNF645Q8N7E2 425 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 TCTEX1D1Q8N7M0 179 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 DDB2Q92466 427 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 FLYWCH2Q96CP2 140 aaKnown RBP8.53□□□□□ -1.04
SPG11-216ENST00000559347 CLCC1Q96S66 551 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 FAM103A1Q9BTL3 118 aaKnown RBP8.53□□□□□ -1.04
SPG11-216ENST00000559347 KLK15Q9H2R5 256 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 GNB4Q9HAV0 340 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 ANXA10Q9UJ72 324 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 A3GALT2U3KPV4 340 aa8.53□□□□□ -1.04
SPG11-216ENST00000559347 TRAV18A0A075B6X5 111 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 EGR2P11161 476 aaPredicted RBP8.52□□□□□ -1.05
SPG11-216ENST00000559347 DUTP33316 252 aaKnown RBP8.52□□□□□ -1.05
SPG11-216ENST00000559347 RPS19P39019 145 aaKnown RBP8.52□□□□□ -1.05
SPG11-216ENST00000559347 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
SPG11-216ENST00000559347 EGFEM1PQ0D2K5 195 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 CBX3Q13185 183 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 KIAA0141Q14154 515 aaPredicted RBP8.52□□□□□ -1.05
SPG11-216ENST00000559347 RTL8BQ17RB0 113 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 UBE2NLQ5JXB2 153 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 TMEM65Q6PI78 240 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 ZNF562Q6V9R5 426 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 PPP1R27Q86WC6 154 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 GVQW1Q8N7I0 195 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 ZNF491Q8N8L2 437 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 BVESQ8NE79 360 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 BEST4Q8NFU0 473 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 ABHD5Q8WTS1 349 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 ARPC1AQ92747 370 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 ADTRPQ96IZ2 230 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 UBE2E2Q96LR5 201 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 GPR61Q9BZJ8 451 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 AUNIPQ9H7T9 357 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 FOXA2Q9Y261 457 aaPredicted RBP8.52□□□□□ -1.05
SPG11-216ENST00000559347 OR2W1Q9Y3N9 320 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 NUBP2Q9Y5Y2 271 aa8.52□□□□□ -1.05
SPG11-216ENST00000559347 IGKV1D-13A0A0B4J2D9 117 aa8.51□□□□□ -1.05
SPG11-216ENST00000559347 I3L521 148 aa8.51□□□□□ -1.05
SPG11-216ENST00000559347 ARPC1BO15143 372 aaKnown RBP8.51□□□□□ -1.05
SPG11-216ENST00000559347 SHOXO15266 292 aa8.51□□□□□ -1.05
SPG11-216ENST00000559347 TUSC2O75896 110 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms