RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
TPM1-216ENST00000558910 TEX38Q6PEX7 206 aa9.42□□□□□ -0.9
TPM1-216ENST00000558910 OR8H1Q8NGG4 311 aa9.42□□□□□ -0.9
TPM1-216ENST00000558910 C5orf30Q96GV9 206 aa9.42□□□□□ -0.9
TPM1-216ENST00000558910 SLC35D1Q9NTN3 355 aa9.42□□□□□ -0.9
TPM1-216ENST00000558910 METTL1Q9UBP6 276 aaKnown RBP9.42□□□□□ -0.9
TPM1-216ENST00000558910 GAB2Q9UQC2 676 aa9.42□□□□□ -0.9
TPM1-216ENST00000558910 PLXNB1O43157 2135 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 SLC25A17O43808 307 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 PROP1O75360 226 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 APOA2P02652 100 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 IGKV1-16P04430 117 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
TPM1-216ENST00000558910 SERPINB10P48595 397 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 NDPQ00604 133 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 OR2B11Q5JQS5 317 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 LY6G6FQ5SQ64 297 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 HACD4Q5VWC8 232 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 GVQW1Q8N7I0 195 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 BVESQ8NE79 360 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 GRPEL2Q8TAA5 225 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 CABLES2Q9BTV7 478 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 OR51J1Q9H342 316 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 SDHAF2Q9NX18 166 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 FBXO7Q9Y3I1 522 aa9.41□□□□□ -0.9
TPM1-216ENST00000558910 TRBV6-7A0A0A0MS04 114 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 TRAV41A0A0B4J266 112 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 A0A1W2PN81 502 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 OR5H14A6NHG9 310 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 RRHO14718 337 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 SSX5O60225 188 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 TUSC2O75896 110 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 CA2P00918 260 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 APELAP0DMC3 54 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 MC5RP33032 325 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 CHRNA7P36544 502 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 RPS19P39019 145 aaKnown RBP9.4□□□□□ -0.9
TPM1-216ENST00000558910 ARPC4P59998 168 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 VBP1P61758 197 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 PSG5Q15238 335 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 ZNF260Q3ZCT1 412 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 FOXB2Q5VYV0 432 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 ETV3LQ6ZN32 361 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
TPM1-216ENST00000558910 PTX4Q96A99 478 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 SLC25A38Q96DW6 304 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 YIPF6Q96EC8 236 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 MS4A10Q96PG2 267 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 GPHA2Q96T91 129 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 DCUN1D5Q9BTE7 237 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 KLK15Q9H2R5 256 aa9.4□□□□□ -0.9
TPM1-216ENST00000558910 CNIH1O95406 144 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 HLA-DRB1P01911 266 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 THBS3P49746 956 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 NCS1P62166 190 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 CX3CL1P78423 397 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 TIMM50Q3ZCQ8 353 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 FAM71F2Q6NXP2 309 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 NPBQ8NG41 125 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 OR5AN1Q8NGI8 311 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 MRAPQ8TCY5 172 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 FLYWCH2Q96CP2 140 aaKnown RBP9.39□□□□□ -0.91
TPM1-216ENST00000558910 RAX2Q96IS3 184 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 GON7Q9BXV9 100 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
TPM1-216ENST00000558910 GNB4Q9HAV0 340 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 U3KQE9 123 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
TPM1-216ENST00000558910 CCL24O00175 119 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 ITGB1BP1O14713 200 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 SHOXO15266 292 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 TNFSF12O43508 249 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 NDUFA3O95167 84 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 DTYMKP23919 212 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 DEFA5Q01523 94 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 PJVKQ0ZLH3 352 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 CBX3Q13185 183 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 FOXE3Q13461 319 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 ARL6IP1Q15041 203 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 UNQ5815/PRO19632Q6UWF5 114 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 IDO2Q6ZQW0 420 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 PPP1R27Q86WC6 154 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 H1FOOQ8IZA3 346 aaPredicted RBP9.38□□□□□ -0.91
TPM1-216ENST00000558910 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 SAMD12Q8N8I0 201 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 LINC00482Q8N8I6 264 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 LFNGQ8NES3 379 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 OR5T1Q8NG75 326 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 HARBI1Q96MB7 349 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 TSNAXQ99598 290 aaKnown RBP9.38□□□□□ -0.91
TPM1-216ENST00000558910 FUNDC2Q9BWH2 189 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 NAA50Q9GZZ1 169 aaKnown RBP9.38□□□□□ -0.91
TPM1-216ENST00000558910 DIABLOQ9NR28 239 aa9.38□□□□□ -0.91
TPM1-216ENST00000558910 ZFP57Q9NU63 452 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms