RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SERPINA7P05543 415 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 SERPINE2P07093 398 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 FAM87AP0C7U9 286 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 PPIAL4FP0DN26 164 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 COX6A1P12074 109 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 CD99P14209 185 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 PI3P19957 117 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 AZU1P20160 251 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 OMGP23515 440 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ATP6V0CP27449 155 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 GNG4P50150 75 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 FXYD4P59646 89 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 SUMO1P63165 101 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 EWSR1Q01844 656 aaKnown RBP eCLIP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF92Q03936 586 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MZT1Q08AG7 82 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 LTC4SQ16873 150 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF585BQ52M93 769 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 PDZD11Q5EBL8 140 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF506Q5JVG8 444 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 DCAF12Q5T6F0 453 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 FAM78BQ5VT40 261 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 LCN10Q6JVE6 187 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 C12orf54Q6X4T0 127 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 SHISA6Q6ZSJ9 500 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 DEFB119Q8N690 84 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 BOLLQ8N9W6 283 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 OR5A1Q8NGJ0 315 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 FAM213BQ8TBF2 198 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 VN1R17PQ8TDU5 208 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 SAP25Q8TEE9 199 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 APH1AQ96BI3 265 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MSI2Q96DH6 328 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ATP5SQ99766 215 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MAP1LC3BQ9GZQ8 125 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 TMEM231Q9H6L2 316 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 UBE2ZQ9H832 354 aaPredicted RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 Q9N2K0 584 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 RAB9BQ9NP90 201 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 SLC7A10Q9NS82 523 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 TMEM106BQ9NUM4 274 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MRPL16Q9NX20 251 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF319Q9P2F9 582 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 FUT9Q9Y231 359 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 RCL1Q9Y2P8 373 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 POLDIP2Q9Y2S7 368 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 CACNA1CQ13936 2221 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 A0A0J9YW62 118 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 A0A1W2PP11 408 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 H3BQ15 152 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 SIRPB1O00241 398 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 LCE2BO14633 110 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 TNFSF11O14788 317 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 GEMIN2O14893 280 aaKnown RBP4.69□□□□□ -1.66
GABPB1-207ENST00000558335 CD5LO43866 347 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 GNG7O60262 68 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 TUSC2O75896 110 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 TMEM50AO95807 157 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 NUDT3O95989 172 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 NAPSAO96009 420 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 PPIAL4GP0DN37 164 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF32P17041 273 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 USF1P22415 310 aaPredicted RBP4.69□□□□□ -1.66
GABPB1-207ENST00000558335 GPR6P46095 362 aaPredicted RBP4.69□□□□□ -1.66
GABPB1-207ENST00000558335 GPM6AP51674 278 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 GNG3P63215 75 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 HLA-DRB3P79483 266 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 LCN2P80188 198 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 PSG4Q00888 419 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 ID3Q02535 119 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 MMDQ15546 238 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 PMCHL1Q16048 86 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 IGFBP7Q16270 282 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 OTPQ5XKR4 325 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF787Q6DD87 383 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 GUSBP11Q6P575 273 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 FA2HQ7L5A8 372 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 LYZL2Q7Z4W2 148 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 C1QL2Q7Z5L3 287 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 TBC1D26Q86UD7 250 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 LSRQ86X29 649 aaPredicted RBP4.69□□□□□ -1.66
GABPB1-207ENST00000558335 DOLPP1Q86YN1 238 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 STPG4Q8N801 248 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF611Q8N823 705 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 ZIC4Q8N9L1 334 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 PIGCQ92535 297 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 PTH2Q96A98 100 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 C5orf30Q96GV9 206 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 LIN37Q96GY3 246 aaPredicted RBP4.69□□□□□ -1.66
GABPB1-207ENST00000558335 SNX22Q96L94 193 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 FAM173AQ9BQD7 235 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 TXNDC17Q9BRA2 123 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 CABLES2Q9BTV7 478 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 REPIN1Q9BWE0 567 aaKnown RBP4.69□□□□□ -1.66
GABPB1-207ENST00000558335 ZDHHC11Q9H8X9 412 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 KCNIP2Q9NS61 270 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 KCNIP1Q9NZI2 227 aa4.69□□□□□ -1.66
GABPB1-207ENST00000558335 MTCH1Q9NZJ7 389 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms